Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1721 ATGGAAACCACCTCAGTTTCCAAAATGCAGTTTGCATTGTTTTGTTTGGCGTTGTGGTTGGGTGTTCAGCTGGAGTGGGTTCACTGTACTGTTACCTACGACAGAAAGGCCATTCTCATCAATGGCCAAAGGAGACTCCTTTTTTCTGGCTCTATACATTACCCCAGAAGTACCCCAGATATGTGGGAAGATCTGATTTACAAGGCTAAAGAAGGAGGTCTAGACGTCATTGAAACCTACGTCTTTTGGAATGTTCACGAGCCTTCTCCTGGCAATTTCAACTTTGAAGGAAGGTACGATCTGGTGAGGTTCGTGAAGACAATACAGAAAGCGGGGCTATATGCTCATCTTCGCATTGGACCTTATGTCTGTGCAGAATGGAACTTCGGAGGATTTCCTGTTTGGCTCAAGTATGTTCCGGGCATCAGCTTTAGAACAGACAATGAACCTTTCAAGAGGGCAATGCAAGGGTTCACCGAGAAGATTGTGGGAATGATGAAGAGTGAACGTCTCTATGAATCTCAGGGTGGCCCTATCATACTCTCTCAGATTGAGAATGAGTATGGGGCACAGAGTAAATTACTTGGACCTGCTGGCCAAAATTATGTGAACTGGGCTGCAAAAATGGCTATTGAAACGGGAACGGGGGTCCCCTGGGTGATGTGCAAGGAAGATGACGCACCAGATCCTGTGATAAACACATGCAATGGCTTTTACTGTGATTATTTTACTCCTAATAAACCCTATAAGCCTTCAATTTGGACTGAGGCTTGGAGTGGCTGGTTTTCTGAATTTGGAGGTTCAATTCATGAAAGACCTGTTCAGGATTTGGCATTTGCAGTTGCCCGATTCATACAGAAAGGAGGATCTTTTGTAAACTACTACATGTATCATGGGGGAACCAATTTTGGCCGAACAGCTGGAGGCCCTTTCATCACTACAAGTTATGATTATGATGCTCCACTGGATGAATATGGTTTGATTAGGCAACCCAAGTATGGTCATCTGAAGGATCTTCATAAGGCTATGAAGATGTGTGAGCCGGCTTTAATTTCAACTGACCCAGCTGTTACTTCATTGGGGAACTATCAACAG 1095 0.4438 METTSVSKMQFALFCLALWLGVQLEWVHCTVTYDRKAILINGQRRLLFSGSIHYPRSTPDMWEDLIYKAKEGGLDVIETYVFWNVHEPSPGNFNFEGRYDLVRFVKTIQKAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNEPFKRAMQGFTEKIVGMMKSERLYESQGGPIILSQIENEYGAQSKLLGPAGQNYVNWAAKMAIETGTGVPWVMCKEDDAPDPVINTCNGFYCDYFTPNKPYKPSIWTEAWSGWFSEFGGSIHERPVQDLAFAVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLIRQPKYGHLKDLHKAMKMCEPALISTDPAVTSLGNYQQ 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1721 365 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 176 188 IPR019801 GO:0004553|GO:0005975
Pvu2g1721 365 PANTHER BETA-GALACTOSIDASE 3 5 365 - -
Pvu2g1721 365 PRINTS Glycosyl hydrolase family 35 signature 41 58 IPR001944 GO:0004553|GO:0005975
Pvu2g1721 365 PRINTS Glycosyl hydrolase family 35 signature 62 80 IPR001944 GO:0004553|GO:0005975
Pvu2g1721 365 PRINTS Glycosyl hydrolase family 35 signature 117 136 IPR001944 GO:0004553|GO:0005975
Pvu2g1721 365 PRINTS Glycosyl hydrolase family 35 signature 174 189 IPR001944 GO:0004553|GO:0005975
Pvu2g1721 365 PRINTS Glycosyl hydrolase family 35 signature 253 268 IPR001944 GO:0004553|GO:0005975
Pvu2g1721 365 PRINTS Glycosyl hydrolase family 35 signature 290 305 IPR001944 GO:0004553|GO:0005975
Pvu2g1721 365 PRINTS Glycosyl hydrolase family 35 signature 310 326 IPR001944 GO:0004553|GO:0005975
Pvu2g1721 365 Pfam Glycosyl hydrolases family 35 38 342 IPR031330 -
Pvu2g1721 365 SUPERFAMILY (Trans)glycosidases 28 347 IPR017853 -
Pvu2g1721 365 PANTHER BETA-GALACTOSIDASE RELATED 5 365 IPR001944 GO:0004553|GO:0005975
Pvu2g1721 365 Gene3D Glycosidases 27 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1721 Pvu-Chr2 30942687 30945153 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0129 9 2021544 2026965 Pvu2g1721 2 30942687 30945153 ECH
Pvu1g0113 1 950888 956952 Pvu2g1721 2 30942687 30945153 ECH
Pvu2g1721 2 30942687 30945153 Pvu2g1721 2 30942687 30945153 ECH