Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1067 ATGCTTGGCGGTGGAAATGGAGATGGAGAGGCAGCACCACCCTCCACGGCCGCGCGTTCCAGAAGTGATCTCCGACCACGCGCTTCCACGGAGAGCGTTTTCAACTGTGGAGACACCGCAGGGTATAGCCCCGGTCCCATGACTCTGTTTTCTAGCTTGTTCGGCGATGGTGATGGCGATGAGTATAAGTCGTTCTCGGAGTTCCTTGCCGGCGCCATGGTGGACCCCATTCCTCTTCGGTCTTCTCCAGATTCAGCTTCTCAAGGACAATTTGGAATGACACAGCAGCAAATGCTAGCACAGGTCACAGCCCACACTAATGTGCAAATCCAAGCTGAACATGCTACCTCATTGACACAGGTTCCTACAACTATTTCCACCACTGTACCGCAGCTGATATCACTACCACCACCATCAATGTCAGCTTCTGGGGTAACAAAATCTTTTGGTTTTTTTCACTCTCAACAGAAATTGCACTCTCCTTCTATCATTGTTGATAAGCCTAATGATGATGGCTACAACTGGAGGAAGTATGGGCAGAAACCTGTAAAGGGTAGTAACTTCTCTCGAAGTTACTACAAATGCACACATCCAAATTGCCCTGTCAAGAAAAAGCTTGAGCTAACTCTTCAGGGTCATGTAACTGCAATTATTTATAAAGGAGAGCACAACCATCAACGTAAGACCACAAAAGGCACCCTAACTTCATCTGGGAATTCAGATAGGTTGAAAGAAGAGATGAGTTCTCACTCCATGTCCCAAGTGGATCTAGAATTTAGTCAGGCTGAACATGGGTCTGGAACAAGTGACAGTGAGGAAGTAGGTTATTATGAAACTGAAGTGGATGAGAAAAATGATGAACCTGATCCCAAGAGGAGAAACACAAAAGCCAAACTCGAGGATCCAGCTTCTTTAAATTTGCATAGAACTGTGGCAGAGTCTAGGATCATTGTGCAAACAACAAGTGAAGTGGATCTTTTGGATGATGGATATAGATGGCGCAAATATGGACAGAAAGTTGTCAAAGGCAACCCATATCCAAGGAGCTATTACAAGTGCACAACCCCAGGTTGCAATGTTCGGAAGCATGTTGAGAGGGCTTCAACAGATCCTAAAGCTGTAGTAACAACATATGAAGGAAAACATAATCATGATGTACCAACAGTTAAGACTAATAGTCACACACTTGCCAACAATACTGCATCACAGCTAAAACCAAAAAATGTCACCGATGAGAAGCATGGTTTCAGCAGCAGGGGTGTTGGGGGCTATGAGCAGGGACCTGTGGCAAGTCTAACATTAAAGCAAGAGTAG 1314 0.4536 MLGGGNGDGEAAPPSTAARSRSDLRPRASTESVFNCGDTAGYSPGPMTLFSSLFGDGDGDEYKSFSEFLAGAMVDPIPLRSSPDSASQGQFGMTQQQMLAQVTAHTNVQIQAEHATSLTQVPTTISTTVPQLISLPPPSMSASGVTKSFGFFHSQQKLHSPSIIVDKPNDDGYNWRKYGQKPVKGSNFSRSYYKCTHPNCPVKKKLELTLQGHVTAIIYKGEHNHQRKTTKGTLTSSGNSDRLKEEMSSHSMSQVDLEFSQAEHGSGTSDSEEVGYYETEVDEKNDEPDPKRRNTKAKLEDPASLNLHRTVAESRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVVTTYEGKHNHDVPTVKTNSHTLANNTASQLKPKNVTDEKHGFSSRGVGGYEQGPVASLTLKQE* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1067 437 MobiDBLite consensus disorder prediction 403 437 - -
Pvu2g1067 437 MobiDBLite consensus disorder prediction 221 301 - -
Pvu2g1067 437 ProSiteProfiles WRKY domain profile. 322 387 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g1067 437 MobiDBLite consensus disorder prediction 1 37 - -
Pvu2g1067 437 MobiDBLite consensus disorder prediction 284 301 - -
Pvu2g1067 437 SUPERFAMILY WRKY DNA-binding domain 319 387 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g1067 437 Gene3D WRKY domain 160 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g1067 437 Gene3D WRKY domain 312 388 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g1067 437 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 17 80 IPR044810 GO:0003700
Pvu2g1067 437 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 87 437 IPR044810 GO:0003700
Pvu2g1067 437 Pfam WRKY DNA -binding domain 328 385 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g1067 437 Pfam WRKY DNA -binding domain 170 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g1067 437 MobiDBLite consensus disorder prediction 252 268 - -
Pvu2g1067 437 SUPERFAMILY WRKY DNA-binding domain 167 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g1067 437 SMART WRKY_cls 327 386 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g1067 437 SMART WRKY_cls 169 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g1067 437 ProSiteProfiles WRKY domain profile. 169 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g1067 437 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 17 80 - -
Pvu2g1067 437 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 87 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1067 Pvu-Chr2 20868782 20871665 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu2g1067 WRKY 1.2e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1067 2 20868782 20871665 Pvu2g1067 2 20868782 20871665 ECH