Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1057 ATGTCCGCGGAGAAGGAGAGAGAGACCCAAGTTTACATCGCCAAGCTTTCTGAGCAAGCTGAGAGATATGAAGAAATGGTTGAATGCATGAAGGCAATTGCAAAACTTGATCTAGAACTGACCGTGGAAGAGAGGAACCTGCTCTCTGTGGGATATAAAAATGTGATTGGTGCACGAAGAGCTTCTTGGCGCATTATGTCTTCTATTGAACAGAAGGAAGAGTCTAAAGGAAATGAGAACAACGCAAAAATGATCAAGAATTATCGTCAAAAGGTGGAAGAGGAACTCTCCAAAATTTGCAGCGATATTCTCTCAATTATTGACAAGCATCTCGTTCCTTCTTCCACCTCAGGAGAAGCCACCGTTTTCTACTATAAGATGAAAGGTGACTATTATCGATATCTAGCTGAGTTCAAGACCGACCAAGAAAGAAAGGAGGCAGCTGAACAATCACTTAAGGGATATGAGGCTGCTTTAGCAACTGCAAACACTGATCTTCCATCAACACATCCAATCCGTCTTGGCCTGGCACTCAACTTCTCAGTCTTCTATTATGAGATAATGAACTCTCCTGAAAGGGCATGCCATTTGGCTAAGCAAGCTTTTGATGAAGCAATTGCTGAGTTAGACACCTTGAGTGAAGAGTCATACAAGGACAGCACTTTGATTATGCAGCTGTTGAGAGACAATCTCACTCTCTGGACCTCTGATTTACCCGAGGATGGAGGTGATGAAATCAAACCAGAAGAAGTCAAACCTGCTGCCCCTGAGCAGTGA 777 0.4337 MSAEKERETQVYIAKLSEQAERYEEMVECMKAIAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENNAKMIKNYRQKVEEELSKICSDILSIIDKHLVPSSTSGEATVFYYKMKGDYYRYLAEFKTDQERKEAAEQSLKGYEAALATANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGDEIKPEEVKPAAPEQ* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1057 258 MobiDBLite consensus disorder prediction 237 258 - -
Pvu2g1057 258 SMART 1433_4 7 248 IPR023410 -
Pvu2g1057 258 Coils Coil 13 33 - -
Pvu2g1057 258 Pfam 14-3-3 protein 14 235 IPR023410 -
Pvu2g1057 258 MobiDBLite consensus disorder prediction 240 258 - -
Pvu2g1057 258 PANTHER 14-3-3 PROTEIN 3 248 IPR000308 -
Pvu2g1057 258 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Pvu2g1057 258 Coils Coil 195 215 - -
Pvu2g1057 258 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Pvu2g1057 258 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Pvu2g1057 258 PANTHER BNAC03G57490D PROTEIN 3 248 - -
Pvu2g1057 258 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Pvu2g1057 258 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Pvu2g1057 258 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Pvu2g1057 258 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Pvu2g1057 258 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Pvu2g1057 258 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Pvu2g1057 258 Coils Coil 145 165 - -
Pvu2g1057 258 PIRSF 14-3-3 1 247 IPR000308 -
Pvu2g1057 258 Gene3D - 1 246 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1057 Pvu-Chr2 20470454 20474678 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1057 2 20470454 20474678 Pvu2g1057 2 20470454 20474678 ECH
Pvu2g1057 2 20470454 20474678 Pvu3g0444 3 4827912 4831544 PCT