Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0979 ATGGATGATGAAGTTGTTCAGCGAGTGTTCCATGAAGGAGGACGCGATTACTTCCAACAACAGCCTTCAACTTCTTCGTCTTCGTCTTCCATCCTCCAATCTCTCCCTCTCCATGTGTCTTTCGATCATGGATATTATTTGTTGGTAAAATCTATTCAAGAACTCCGAGAGAAAAAGGATGGCCTTGTTACTGTTGGCATTGGTGGTCCAAGTGGATCTGGTAAAACAAGCTTAGCAGAAAAGGTGGCATCTGTTATTGGGTGTACTGTTATATCAATGGGGAATTACCGTCATGGGGTTGATGAAGGGAATGATGTGGATTCTATAGATTTTGATACGCTGATCAAGAATCTTGAGGATTTGACTAAAGGCAAGGATACATTAATCCCCAAGTTTGACTATCAGCAAAAGAAGCGTGTTGGCTATAAAGCAATAAAGAGCGCTTCATCTGGGGTGGTAATAGTTGATGGCACATATGCATTGCATGCAAAACTGCGGTCTTTACTGGACATTCGAGTTGCTGTGGTTGGTGGTGTTCATTTTAGCTTGCTTTCTAAAGTTCGCTACGACATTGGAGATTCTTGTTCGCTGGATTACCTTATAGATAGCATTTTTCCACTGTTTAGAAAACACATTGAGCCAGATCTTCATCATGCACAGATCAGAATTAATAACAGCTTTGTCTCATCATTCAGAGAGGCAATCTACAAGGTTAAATGCAGAAGGGAGTCTACAGATCCAGGTTCCGCTTTTCAAGGAAATGAAGCCCAAACAGACAATTTTATTGAAATGTACCTTAGACCACCTTCATCTAGCGAAGAAGCAAGGATAAATGATTGGATCAAAGTGCGGCAGTCTGGAATTAGATATTATCTATCACTTGGTGACCAGAGGATTGTTGACAAGAATTTCATTATCAGGCCTAAAGCTGAATTTGAGGTTGGTCGAATGACATTGGGTGGATTGTTGGCTCTTGGGTATACTGTTGTGGTTAGTTATAAGCGTGCATCCACAACTATCAATAGTGGCAAGGTTACCATGTCTTTTGAGACCATTGATGTTCTTGGTGAGACATTCATGGTGATGAGAGGAACTAATAGAAAGACAGTTGGAACAGAAGCATCAAGGATGCGTATTGATGGACCTTGGATTACTAAATCATATCTGGAAATGATTCTGGAGAGAAAAGGTGTACCTCGTCTTAGTACTCCACCACTTGTGTCTAATACAATTGTGGCTGGCAGTCAAGAAACAGCAATCACTGCGCCAAAGCCAATCCGTGTTACTCCTAATGTTGTTACTGGGCTTGAGGATTTACCTCAGCCATGGACTCGATCCCCGACAAAATCTAAAATGGAACCTGTTGTTGCTGCATGGCATTTCTTATCTTCCGATTCCTCCCAGCCTGACAATTCAGTCCTAGATCCTTCATCTTTCAGGGATAGTATTAGGCTTGCTCCAATGCCTGATTCATTTGACTTGGACAGGGGATTGCTTTTGGCTGTTCAAGCAATACAAGCATTGTTGGAGAATAAAGGTGTCCCAGTCATAGTTGGAATTGGAGGTCCAAGTGGGTCTGGGAAGACTAGTTTGGCTCATAAAATGGCAAATATAATTGGTTGTGAAGTAGTTTCCCTGGAAAGCTATTATAAACAAGTAAAGGATTTTAAATATGATGACTTCAGCGCACTTGATTTATCTCTGCTATCGAAGAACATTGATGACATAAGAAATGGTCAAAGAACAAAAGTACCTATATTTGACTTGGAAAGTGGTGCTCGAAATGGTTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGCGTCTTTGCTTTGCATCCTGATATCCGAATATCACTTGACTTGTGGATTGCTGTTGTTGGAGGTGTTCATTCACATTTGATTTCACGAGTTCAAAGGGATAAAAGTAGAGTGGGATGCTTTATTTCTCAAAATGAGATCATGATGACAGTGTTTCCTATGTTCCAGCAGCTTATTGAACCTCATCTTGTTCATGCACATCTTAAAATTCGAAATGATTTTGATCCTGTGCTTTCTCCTGAGAGTTCATTATTTGTATTAAAGAGTAACAAAAAAGTAGCATATCAAGATATTGTTGCAATTCTTGATTCAGCAAAATTTTGCAGTTCGGTGCAGAAATTCATTGACATTTATATTAGGCTTCCTGGGATCCCTTCTAATGGACAGTTGAGAGACAGTGATTGTATTCGAGTCAGAATATGTGAAGGCAGATTTGCTTTGCTGATACGAGAGCCCATCAAAGAAGGGAACTTTATCATTCAGCCCAAAGTGGATTTTGATATTAGCATTAGTACGGTTGCTGGCCTTCTTAATCTTGGGTATCAAGCAGTTGCTTATATTGAAGCATCTGCATTCATCTATCAAGATGGAAAGATTTTAATTGAGGTTGATCACCTTCAAGATGTACCTGGCCCATACATTCAGATAAAGGGTGTTAATAAAGATGCAGTAGCAGCGGCTGGTTCAATGCTTAAATTGGATACTTCATATACGACTAAGAGTTATCTTGAAATAATTTTGGAAAGACTACCGGTGATTGAAAGAACTTCTGGTGGGATTAATTCTCAACAATCAGCAAGGCTGCTAGAGATTGTTGAATTTATTCAATCTCAGGGGAGTAGCTCTGCTTCGGAATCCTCATCAGGTAGGGTAGTCTCTCCAATTGAAGGGATTATTGAGGAGATGCAATCAAGGATTAAAAGACTTGAAAAGTGGCTAGCGATAAATACGGTCCTATGGACATTTCTGATGTCTGCCCTTGTTGGTTATTCACTGTATCAAAGGAGGCGTCAATAA 2853 0.3999 MDDEVVQRVFHEGGRDYFQQQPSTSSSSSSILQSLPLHVSFDHGYYLLVKSIQELREKKDGLVTVGIGGPSGSGKTSLAEKVASVIGCTVISMGNYRHGVDEGNDVDSIDFDTLIKNLEDLTKGKDTLIPKFDYQQKKRVGYKAIKSASSGVVIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRRESTDPGSAFQGNEAQTDNFIEMYLRPPSSSEEARINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYTVVVSYKRASTTINSGKVTMSFETIDVLGETFMVMRGTNRKTVGTEASRMRIDGPWITKSYLEMILERKGVPRLSTPPLVSNTIVAGSQETAITAPKPIRVTPNVVTGLEDLPQPWTRSPTKSKMEPVVAAWHFLSSDSSQPDNSVLDPSSFRDSIRLAPMPDSFDLDRGLLLAVQAIQALLENKGVPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKQVKDFKYDDFSALDLSLLSKNIDDIRNGQRTKVPIFDLESGARNGFKELEVSEDCGVIIFEGVFALHPDIRISLDLWIAVVGGVHSHLISRVQRDKSRVGCFISQNEIMMTVFPMFQQLIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDIVAILDSAKFCSSVQKFIDIYIRLPGIPSNGQLRDSDCIRVRICEGRFALLIREPIKEGNFIIQPKVDFDISISTVAGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVPGPYIQIKGVNKDAVAAAGSMLKLDTSYTTKSYLEIILERLPVIERTSGGINSQQSARLLEIVEFIQSQGSSSASESSSGRVVSPIEGIIEEMQSRIKRLEKWLAINTVLWTFLMSALVGYSLYQRRRQ* 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0979 950 Gene3D - 63 243 IPR027417 -
Pvu2g0979 950 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 503 685 IPR027417 -
Pvu2g0979 950 PANTHER URIDINE KINASE 2 416 - -
Pvu2g0979 950 PANTHER URIDINE KINASE 601 941 - -
Pvu2g0979 950 PANTHER URIDINE KINASE 473 602 - -
Pvu2g0979 950 CDD UMPK_like 517 685 - -
Pvu2g0979 950 SMART AAA_5 514 658 IPR003593 -
Pvu2g0979 950 SMART AAA_5 61 211 IPR003593 -
Pvu2g0979 950 PRINTS Uridine kinase signature 515 532 - -
Pvu2g0979 950 PRINTS Uridine kinase signature 542 553 - -
Pvu2g0979 950 PRINTS Uridine kinase signature 636 646 - -
Pvu2g0979 950 Pfam Phosphoribulokinase / Uridine kinase family 517 682 IPR006083 GO:0005524|GO:0016301
Pvu2g0979 950 Pfam Phosphoribulokinase / Uridine kinase family 106 223 IPR006083 GO:0005524|GO:0016301
Pvu2g0979 950 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 601 941 - -
Pvu2g0979 950 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 2 416 - -
Pvu2g0979 950 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 473 602 - -
Pvu2g0979 950 Gene3D - 700 862 - -
Pvu2g0979 950 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 176 IPR027417 -
Pvu2g0979 950 CDD UMPK_like 64 226 - -
Pvu2g0979 950 Gene3D - 514 691 IPR027417 -
Pvu2g0979 950 SUPERFAMILY CYTH-like phosphatases 710 857 IPR033469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0979 Pvu-Chr2 17163692 17193014 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0979 510 673 PRT Gene Family AT1G55810 27.528 4.80e-11 64.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0979 2 17163692 17193014 Pvu2g0979 2 17163692 17193014 ECH
Pvu2g0979 2 17163692 17193014 Pvu3g1869 3 39214634 39229001 PCT