Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0977 ATGATGGACTTAGCAACCCACAAGTCCCACTTCATCAAAAACCATTTCCTTCTCTTCTTCTGCTTATTTCTATGCCTGTCTGCTTCACAATCAAGCTATTCATTCCCCAAAGAAGCCCACCCCAGCAGGTCTGGTTACCTTCCAGTCAACCCTGCTTCTGCTTCTGCAATTTTCTACGCCTTCTATGAAGCCCAAAACTCCACTCTGCATCTCTCCCAAACCCCACTTCTCATTTGGCTCCAAGGTGGCCCTGGCTGCTCCTCCATGCTTGCCAACTTCTATGAGCTTGGACCCTGGCGAGTCACCCAATCCCTCACCCTTCAACGCAACCCTGCTTCTTGGAACAGAATTTTTGGCCTTCTTTTTCTTGATAATCCCATTGGATCTGGCTTCAGTGTCGCCTCAACCCCACAAGAGATCCCAAAAGATCAAAACGCCGTTGCCAAACACCTCTTCGCTGCTATAACCAACTTTCTTCAACTGGATCCTCTTTTCAAGCATCGCCCTATTTATATTACTGGAGAAAGCTATGCTGGGAAGTATGTGCCTGCAATTGGGTACTATATATTGAAGAAAAATGAAAAGTTGGAGGCTTCCGAAAGAGTGAATCTGGGTGGTGTAGCCATTGGGGATGGGTTAACTGACCCCGAAACTCAAGTTGCGTCTCATGCAGTGAATGCTTATTATGCTGGATTGATCAATGAGAGGCAGAAGAAAGAGTTGGAAAAAGTTCAATTGGAAGCAGTTGCGTTGACCCAAATGAGGAATTGGAGTGAAGCAACAGATGCGAGAAGCAGGGTGTTGGGGATGTTGCAAGAGATGACAGGGTTAGCTACTTTGTATGACTATACAAAGAAGAGACCGTACGAGGATGATTTGGTGGAAGGATTGTTGAACATAGGGGAGGTGAAGAAGGCCCTTGGGGTGAATGAATCGTTTGTGTATGAGATATGTAGTGATGTTGTTGGGGAGGAATTGCATGATGATGTGATGAAAAGTGTGAAAGATATGGTGGAATACTTGGTGAGGAGGAGCAGGGTGTTGTTGTATGAAGGTTTGTATGATTTGAGGGATGGTGTGGTTCAAACAGAGGTGTGGGTGAAGACAATGCAATGGGAAGGGATAGAGAAGTTTCTGAATGCTGAAAGGAAGATATGGAAGGTGAATGGAGAGCTTGCTGGTTATGTACAGAATTGGAAGTCTCTCACCAATGTTGTGGTTTTGGGAGCTGGTCATCTTCTGCCCACAGACCAGCCTCTTAACTCTCAAGCTATGATAGAAGACTGGGTTCTCCAAACGGGTTTCTTTAAAAGCGTGTAG 1320 0.4561 MMDLATHKSHFIKNHFLLFFCLFLCLSASQSSYSFPKEAHPSRSGYLPVNPASASAIFYAFYEAQNSTLHLSQTPLLIWLQGGPGCSSMLANFYELGPWRVTQSLTLQRNPASWNRIFGLLFLDNPIGSGFSVASTPQEIPKDQNAVAKHLFAAITNFLQLDPLFKHRPIYITGESYAGKYVPAIGYYILKKNEKLEASERVNLGGVAIGDGLTDPETQVASHAVNAYYAGLINERQKKELEKVQLEAVALTQMRNWSEATDARSRVLGMLQEMTGLATLYDYTKKRPYEDDLVEGLLNIGEVKKALGVNESFVYEICSDVVGEELHDDVMKSVKDMVEYLVRRSRVLLYEGLYDLRDGVVQTEVWVKTMQWEGIEKFLNAERKIWKVNGELAGYVQNWKSLTNVVVLGAGHLLPTDQPLNSQAMIEDWVLQTGFFKSV* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0977 439 SUPERFAMILY alpha/beta-Hydrolases 40 431 IPR029058 -
Pvu2g0977 439 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 122 IPR001563 GO:0004185|GO:0006508
Pvu2g0977 439 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 133 IPR001563 GO:0004185|GO:0006508
Pvu2g0977 439 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 183 IPR001563 GO:0004185|GO:0006508
Pvu2g0977 439 PRINTS Carboxypeptidase C serine protease (S10) family signature 402 415 IPR001563 GO:0004185|GO:0006508
Pvu2g0977 439 Gene3D alpha/beta hydrolase 26 436 IPR029058 -
Pvu2g0977 439 ProSitePatterns Serine carboxypeptidases, serine active site. 172 179 IPR018202 GO:0004185
Pvu2g0977 439 Coils Coil 229 254 - -
Pvu2g0977 439 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 21 433 IPR001563 GO:0004185|GO:0006508
Pvu2g0977 439 PANTHER CARBOXYPEPTIDASE 21 433 - -
Pvu2g0977 439 Pfam Serine carboxypeptidase 41 430 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0977 Pvu-Chr2 17134773 17136639 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0977 291 430 Calmodulin-binding Proteins AT2G22960 23.077 5.18e-07 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0977 2 17134773 17136639 Pvu2g0977 2 17134773 17136639 ECH