Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0958 ATGGAGTATTGTAAAGAAGGGTCGTCTTACTATAACGTTCTTGGTGTTAGTTCGGATTCTAATGTGGAAGAGATAAAGCGTGCTTACAGAAAGCTTGCTATGCAATGGCACCCTGATAGGTGGACGAATACGCCTTCTTTGTTGGGTGAAGCCAAACACAAATTCCAGCAAATTCAAGAAGCCTATTCGGTGTTGTCGGACAGTAAGAAAAGAACTGTGTATGATGCGGGTCTGTATGATCCTCAAGAGGAAGAGGACGAGGGGTTTTCTGATTTTTTGGAAGAAATGTTGTCTCTTATGGCTCAAGAGAGGAAAGAGAAAAAGCATTACGATCTGGAAGAGTTGCAGGGCATGTTGATGGATATGGCTAAAGGATTCGAGTGTCCTTCGATGTACTGTGGGGTGCCCTCTGTGATTGATGAGTCTCGGTGCTTAAAGAGGACTCGTTTTGACACAAGCACAATGGAGACTAAGGGGTCACATTTTCAAGTACCTGATCTTAACCTCTATTGCAGTTAA 519 0.4335 MEYCKEGSSYYNVLGVSSDSNVEEIKRAYRKLAMQWHPDRWTNTPSLLGEAKHKFQQIQEAYSVLSDSKKRTVYDAGLYDPQEEEDEGFSDFLEEMLSLMAQERKEKKHYDLEELQGMLMDMAKGFECPSMYCGVPSVIDESRCLKRTRFDTSTMETKGSHFQVPDLNLYCS* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0958 172 ProSitePatterns Nt-dnaJ domain signature. 55 74 IPR018253 -
Pvu2g0958 172 SMART dnaj_3 8 70 IPR001623 -
Pvu2g0958 172 PANTHER PUTATIVE, EXPRESSED-RELATED 5 169 - -
Pvu2g0958 172 ProSiteProfiles dnaJ domain profile. 9 78 IPR001623 -
Pvu2g0958 172 Pfam DnaJ domain 10 75 IPR001623 -
Pvu2g0958 172 SUPERFAMILY Chaperone J-domain 7 81 IPR036869 -
Pvu2g0958 172 PRINTS DnaJ domain signature 11 29 IPR001623 -
Pvu2g0958 172 PRINTS DnaJ domain signature 29 44 IPR001623 -
Pvu2g0958 172 PRINTS DnaJ domain signature 50 70 IPR001623 -
Pvu2g0958 172 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 5 169 - -
Pvu2g0958 172 CDD DnaJ 10 67 IPR001623 -
Pvu2g0958 172 Gene3D DnaJ domain 1 117 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0958 Pvu-Chr2 16761443 16762906 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0958 10 76 C2H2 Transcription Factor Family AT1G74250 45.588 9.78e-13 63.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0958 2 16761443 16762906 Pvu2g0958 2 16761443 16762906 ECH