Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0957 ATGGGAATACCTGATAGCTCACTATTAGATCTAGAAAAAGTAAGGTCTTGGGTTTCTTGGGGAGAAAGTGATTTGTGTTATTTGTCTGAGAAATTTGATATGCACCATAGCGGAAGCAAAATGTGTTGTGTGTGCAATAGGAATTTCACTGAGATGACTCAGCAGCACAGATACAATTGCAAAAGCTGTGGCCGTTGGTTCTGTGGGAAATGCATCGGGGTTTGTGATCTCCCAAATCTTGAATCTGAGAACATGGGATTCAAGGAAACTATTCGTTCCTGCAAGTTTTGTTTAGATGCCTATAGGAGGATGTGTTACGAGGGCCAGAGGAAGTGTAGTGAGAAAGTGCACCCTTCTGTCTCTCCTCAAGAGAGTCCAAGACAAAGTCCTGAGCCACCTTCTCCATGCTTTAGTGTTGAAAGTGATAAGATCAGTTCTCCTCTGAATGCTGAATTGAATCTGGGATCTCACTTTGAACGCTGTTTTCATGACCATGATTATGGGTATTATCCTTGTTCTGAAGTCAACAAGAGTTTGACTTCATCTGGTACTCACCCTTCGTCGCTATCTACTCATCCGTCTACCTTCAGGAGTGACGAAGAGGGGATGGAGGATTCTGGGAAGGACTTTCTCAGCCAATCACGTACATATTGTGATAATTATTCAGATATAGATTCAAGTAGCTTTAGTGCTAGACATGACACTTACAACTATAATTCTGTGGGGTCAAGTCCTTCAGATAGCCCTTCTAGGATTGGTTTTACTTCTAGTTGGGCTGGGCTTCCTGTACGGAAAGATCAGGAGAAAAGCCCCGTCCCTCAGAATGATGGTCCCTTTAGTCAACAAAGTATGGCTGTTTTAAGAAAGCCTGAACAAGGGACCGAGGATGCATATACTACTGCTTATTTTTCAGATGACTTGTCTATTTTCCGGAAGAATGAGACTTTGCAGAGGCCATTGGATTTTGAAAACAATAATGATATATGGTTTCCCCCACCACCTGATGATGAAAATGATGATGCAGAAGGAAATTTCTTTGCATATGATGATGAGGATGATGATATTGGTGACTCAGGGGCCATGTTCTCATCCAGTAGCAGTCTATCTAATATGTTTCCTGGAAAGGAGAAACATAATGATGGAAACAAGGAACCTTTAAGAGCTGTCATTGAAGGGCATTTTAGAGCTCTTGTTTCGCAGCTTTTACAAGGAGAGGGAATTAATGTTGGTAAGGAAAATGATTCTGAGGACTGGCTTGACATAGTTGCAACGGTAGCTTGGCAGGCTGCTAACTTTGTGAGGCCAGATACGAGCAAAGGTGGCAGTATGGATCCTGGTGATTATGTAAAGGTCAAATGTATAGCCTCTGGAAGCCCAAGTGAGAGCACCCTTATCAAAGGTGTAGTTTGTACAAAAAATATTAAGCACAAGCGCATGACCTCTCAATACAAAAATCCTAGACTACTCCTTTTAGGAGGAGCTCTGGAATATCAGAAAGTTCCAAATCAATTGGCTTCCTTTGATACATTGTTACAGCAGGAAAATGATCATTTGAAGATGATCATTTCAAAAATTGAGGCTCTTCGACCAAATGTTTTGCTTGTAGAAAAAACTGTAGCTTCGTGTGCCCAGGAATATTTGCTTGCGAAGGAAATCTCCTTGGTGTTAAATGTCAAAAAGCCTTTGATGGAGCGTATAGCTCGATGCACTGGTGCTCTTATCACTCCATCAGTGGATAATTTATCTAAAGCACGACTGGGACACTGTGAGTTGTTCCGGTTAGACAGACTGGTGGAAGATCATGAGACTGCTAATCAGTTAAACAAGAAGCCATCCAAAACATTAATGTTTTTTGAAGGTTGTCCACGGCGATTGGGTTGCACGGTCTTGCTGAAGGGCACATGTCGGGAAGAACTAAAGAAAATTAAGCATGTTGTGCAATTTGCAGTTTTTGCGGCCTACCACTTATCTCTTGAGACCTCATTCCTTGCTGATGAGGGTGCTTCCCTACCTAAAATGATAGTAAAATACTCTACTGACATGCCTGAGAGTGCAACTGCTGACACTGATATTTCTATGATACCTAACACCTTTTCTACAACCATGCCCCAATCAGAGCCTGACGAGGCTTCTAGAGTAAAGGACATTGTTGGCATTGGTTTAAAGCTTGAAAATTTGGGATCTGTGCCGGAGCATCTTGATGATCTTAGTTGCCATTCATATCCAGATACCATGGCAGATTATAGATCTGAGAGTGTACTCTCTGATTCATGCTATAATAATTTAACTTCTAATTTGACTGTAGATTCTGATTATATACATCCGAGCAATGAATCAGACGGGGACACTATTTTTAGTACAAGAGAACTTTTGCAATCAGGTTTGCTTGAAACCATGGTTCAAGAGGAGAGGGAGTGTGGTGAAGTTGTCGACTCAACAAAAGACAAGACTAACGAGGATGAGCTTTCTGGTGAATACTTTTCTGCCACTGATGGTCATCAGAGCATATTGGTATACTTTTCAAGTCATTGTGTTTCAAAAGGAACTGTATGTGAACGTACCAGGTTGCTGCGCATAAAATTTTATGGCTCTTTCGATAAGCCTCTTGGAAGATATCTTCGTGATGATTTGTTTGATCAGGCATGCTGCTGTCAGTCTTGTAAAGAGCCTGCAGAGGCTCATGTCCTTTGTTTTACTCACCAGCAAGGAAATCTCACAATCAATGTTAAGCGCCTTCCCTCTGTGAAGTTACCAGGGGAAAGAGACGGCAAGATCTGGATGTGGCACCGGTGTCTGAGGTGTCCATTTGAGGATGGAGTTCCACCAGCAACTCGGAGAGTTGTCATGTCAGATGCGGCTTGGGGATTATCTTTTGGAAAGTTCTTGGAGCTTAGCTTTTCAAACCATGCAACTGCAAATCGAGTTGCAACCTGTGGACATTCTTTGCAGAGGGATTGCCTTCGTTATTATGGGTTTGGGAGCATGGTTGCTTTCTTCCGGTATTCTCCTATTGATATTCTTTCTGTCCATCTACCTCCATCTGTGTTGGAATTTGGCCACATCCGAGAGGAGTGGATTGGAAAGGAGGCTGAAGAGCTTTTTATTAAAGTGGAAACGTTGTATGGGGAGATATCCAATGTGCTTGGACGTCTGGAAACAAAGATTGTATCTCCTAGTCCTGGAAGTGAATCATCAGATACATGTGACATTCAAAACCACATACTGGATCTGAAAGATATGCTTCGAAGAGAAAGAACTGATTATCATTGTTTGCTACAGTCAGGCATAGTGACCCCACAACCTGGGAAGATGGCGTTAGACATTCTGGAGCTAAATCGCTTGAGGCGATCTCTTCTTATTGGTTCACATGTTTGGGATCACCGACTATATTCATTGGACTCTCTCATTAAAAGAAGTTTTAGCTCCAAGGTTAAACAGGAAAATGAACTTTGTGCAGATTTTAAGGAATTAACAGTCGATTCATTTCACAAGGATCAGAATATTGACTGTGGACCGGAGCAAAATAGTACCCGTCTTTCAAAGTTGCATGAGTCTCACAAAAGTCACATGCTTGCAGAACCAGATGACACAGTTGAACCTTGTGCTTCAGGATCATTAACATGTTATATTGAGGGAGAGAAAGTACATTCAGATGGTGAACTTAACAAAACATTTTCCGAGTGTTTCTCACCAAATGAGTCCAATCTTTCTGAGAAAATAGACTCTGCATGGACTGGAACTGATCAACCTCAAGCCAATGCTGTCCCTGCTGGAAGTATTCAGCCGTGTAATCAACATGATAGCCCTCCGTTAAGACGGTTGACACAGCCAATGAGAGTTCATTCTTTTGATTCAGCAGTAAGAGTCCAAGAAAGAATCAGAAAAGTCTTGCCCTCATCTTTACATTTATCAACACTTAGATCCTTTCATGCTTCTGGAGATTACGGTAATATGGTCAGAGACCCTGTCTCTAACATATTGCAATCTTACGTTCAAATGTTGCCATGGGAGACACAGAAACTAAATCTGATCCTGAGCTCCACTCCAACATTCATATCCTCTGTGTCTGGCATAGCTGAAGGGGCTCGATTGCTGCTTTCCCAAACTTATCACGGTGATAGAGTTATTGCTGTCTATGACAATGATTACTCTAGCGTAATATCCTATGCCCTTAGTTCCAAGGAATATGAAGATTGGGTGTCTGGAAAGTCAGATCTGCCTGAGAGTAGCTGGATTGCTCGTGAGAGAAGCAAAGAAGATTTAGCTACTTCCAGCTTTTCGGCATGGGGTACTCTGGACTTGGATTATATCAATTATGGTAGTAGTTATGGGCCTGAAGATGTTCCATCTTCTGCTGGCTCTCTTCTCCGGGACTCCAAAAAGTCCGTACACTTGCAAATTTCCTTTGGTGATGATTCTGTGGGAGCTGGAGGTAAAGTGAACTTTTCTGTCACTTGTTATTTTGCTAAGCAGTTTGAATCACTTAGAAAAAAGTGCTGCCCTAGTGAGGTTGATTTTGTGCGATCCATGAGCCGTTGCCGGAGATGGAGTGCACAAGGAGGGAAAAGTAATGTATATTTTGCCAAGTCATTGGATGAGAGGTTTATTATTAAACAAGTGACGAAGACAGAACTTGAGTCCTTTGTAGAATTTGCACCTCAGTATTTCAAATACCTGATGGATGCCCTGAACTCCGGGGGCCCAACTTGCCTAGCCAAAATTCTTGGTATTTATCAGGTCACTGTCAAATATCCAAAAGGTGGCAAGGAAACAAAAATAGATCTGATGGTAATGGAGAATCTGTTTTACAAGAGGAATATATCCAGGGTATACGATCTCAAGGGCTCAGAAAGATCTAGGTATAATCCAGACACAACTGGTACAAACAAAGTGATGCTGGACATGAATTTGTTAGAATCCTTGAGAACAAAACCAATATTTCTTGGGAGTAGGGCCAAGAGAAAACTGGAAAGAGCTGTATGGAATGACACATCCTTTTTGGCGTCTGTTGATGTTATGGACTACTCTTTGCTGGTTGGGGTGGATGATGAGCGGAAGGAGTTGGTTTTGGGGATCATTGATTTCATGAGACAATACACATGGGACAAACATTTGGAGACATGGGTGAAGGCTTCTGGGATTCTTGGGGGTCCAAGGAATGCTGCCCCCACAATAGTTTCTCCTAAACAATACAAGAAAAGATTCAGGAAGGCCATGACCACCTACTTTCTCACCTTACCTCTTGAAAATGTATAA 5256 0.4203 MGIPDSSLLDLEKVRSWVSWGESDLCYLSEKFDMHHSGSKMCCVCNRNFTEMTQQHRYNCKSCGRWFCGKCIGVCDLPNLESENMGFKETIRSCKFCLDAYRRMCYEGQRKCSEKVHPSVSPQESPRQSPEPPSPCFSVESDKISSPLNAELNLGSHFERCFHDHDYGYYPCSEVNKSLTSSGTHPSSLSTHPSTFRSDEEGMEDSGKDFLSQSRTYCDNYSDIDSSSFSARHDTYNYNSVGSSPSDSPSRIGFTSSWAGLPVRKDQEKSPVPQNDGPFSQQSMAVLRKPEQGTEDAYTTAYFSDDLSIFRKNETLQRPLDFENNNDIWFPPPPDDENDDAEGNFFAYDDEDDDIGDSGAMFSSSSSLSNMFPGKEKHNDGNKEPLRAVIEGHFRALVSQLLQGEGINVGKENDSEDWLDIVATVAWQAANFVRPDTSKGGSMDPGDYVKVKCIASGSPSESTLIKGVVCTKNIKHKRMTSQYKNPRLLLLGGALEYQKVPNQLASFDTLLQQENDHLKMIISKIEALRPNVLLVEKTVASCAQEYLLAKEISLVLNVKKPLMERIARCTGALITPSVDNLSKARLGHCELFRLDRLVEDHETANQLNKKPSKTLMFFEGCPRRLGCTVLLKGTCREELKKIKHVVQFAVFAAYHLSLETSFLADEGASLPKMIVKYSTDMPESATADTDISMIPNTFSTTMPQSEPDEASRVKDIVGIGLKLENLGSVPEHLDDLSCHSYPDTMADYRSESVLSDSCYNNLTSNLTVDSDYIHPSNESDGDTIFSTRELLQSGLLETMVQEERECGEVVDSTKDKTNEDELSGEYFSATDGHQSILVYFSSHCVSKGTVCERTRLLRIKFYGSFDKPLGRYLRDDLFDQACCCQSCKEPAEAHVLCFTHQQGNLTINVKRLPSVKLPGERDGKIWMWHRCLRCPFEDGVPPATRRVVMSDAAWGLSFGKFLELSFSNHATANRVATCGHSLQRDCLRYYGFGSMVAFFRYSPIDILSVHLPPSVLEFGHIREEWIGKEAEELFIKVETLYGEISNVLGRLETKIVSPSPGSESSDTCDIQNHILDLKDMLRRERTDYHCLLQSGIVTPQPGKMALDILELNRLRRSLLIGSHVWDHRLYSLDSLIKRSFSSKVKQENELCADFKELTVDSFHKDQNIDCGPEQNSTRLSKLHESHKSHMLAEPDDTVEPCASGSLTCYIEGEKVHSDGELNKTFSECFSPNESNLSEKIDSAWTGTDQPQANAVPAGSIQPCNQHDSPPLRRLTQPMRVHSFDSAVRVQERIRKVLPSSLHLSTLRSFHASGDYGNMVRDPVSNILQSYVQMLPWETQKLNLILSSTPTFISSVSGIAEGARLLLSQTYHGDRVIAVYDNDYSSVISYALSSKEYEDWVSGKSDLPESSWIARERSKEDLATSSFSAWGTLDLDYINYGSSYGPEDVPSSAGSLLRDSKKSVHLQISFGDDSVGAGGKVNFSVTCYFAKQFESLRKKCCPSEVDFVRSMSRCRRWSAQGGKSNVYFAKSLDERFIIKQVTKTELESFVEFAPQYFKYLMDALNSGGPTCLAKILGIYQVTVKYPKGGKETKIDLMVMENLFYKRNISRVYDLKGSERSRYNPDTTGTNKVMLDMNLLESLRTKPIFLGSRAKRKLERAVWNDTSFLASVDVMDYSLLVGVDDERKELVLGIIDFMRQYTWDKHLETWVKASGILGGPRNAAPTIVSPKQYKKRFRKAMTTYFLTLPLENV* 1752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0957 1751 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1422 1743 IPR002498 GO:0016307|GO:0046488
Pvu2g0957 1751 Gene3D GroEL 460 633 IPR027409 -
Pvu2g0957 1751 Gene3D - 1601 1744 - -
Pvu2g0957 1751 PANTHER 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1C-RELATED 39 1747 - -
Pvu2g0957 1751 MobiDBLite consensus disorder prediction 262 283 - -
Pvu2g0957 1751 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 39 1747 - -
Pvu2g0957 1751 SUPERFAMILY GroEL apical domain-like 461 633 IPR027409 -
Pvu2g0957 1751 MobiDBLite consensus disorder prediction 181 211 - -
Pvu2g0957 1751 CDD FYVE_like_SF 41 97 - -
Pvu2g0957 1751 MobiDBLite consensus disorder prediction 116 140 - -
Pvu2g0957 1751 MobiDBLite consensus disorder prediction 181 196 - -
Pvu2g0957 1751 Pfam TCP-1/cpn60 chaperonin family 415 656 IPR002423 GO:0005524
Pvu2g0957 1751 SUPERFAMILY SAICAR synthase-like 1474 1743 - -
Pvu2g0957 1751 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1519 1685 IPR002498 GO:0016307|GO:0046488
Pvu2g0957 1751 SUPERFAMILY FYVE/PHD zinc finger 34 103 IPR011011 -
Pvu2g0957 1751 SMART PIPK_2 1455 1744 IPR002498 GO:0016307|GO:0046488
Pvu2g0957 1751 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1451 1600 IPR027484 -
Pvu2g0957 1751 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 36 102 IPR017455 -
Pvu2g0957 1751 CDD PIPKc_PIKfyve 1480 1743 IPR044769 GO:0000285
Pvu2g0957 1751 CDD Fab1_TCP 395 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0957 Pvu-Chr2 16623066 16630933 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0957 1 1747 Acyl Lipid Metabolism Gene Families AT1G71010 53.587 0.0 1682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0957 2 16623066 16630933 Pvu2g0957 2 16623066 16630933 ECH
Pvu3g1317 3 30904587 30915603 Pvu2g0957 2 16623066 16630933 PCT