Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0157 ATGTCTCATCCACCATCACCCTCTTTCCTACTCTGTCATGAACAACACTCCTCTTTCCAACAGCATTCTCCAACTCTCATCACCACCCCATCTTCTTCACCTTCCATTTTTTCCGACAACCACCTCTTCTCCCAACACGACCACCTTCTCTCTCTACTCTCCAAAGAGACCGCAACGCATTTCACTCCCTCCCCTTCCCACCACGTCGTCCGCTGGATTTCTACACTTTCTCACTTCCACGGTTTCGCTCCTCTCACCACCGTTCTTGCCGTGAACTACTTCTACAGGTTCGTTAACAGAAGAAGCTTTCAGAGCGAAGATAAACCGTGGAGGACCCAACTAGCAGCCGTTGCTTGCGTCTCTCTCGCGGCCAAAGTGGAAGAGACACGAGTGCCGCTTCTTTTGGAGTTGCAAGTGGAGGAATCGAAATTTGTGTTTGAAGCGAACACCATACATACAATGGAGCTCCTCGTGCTGTCCACTCTCGAATGGAAAATGAACCCTGTCACCCCAATCTGTTTCTTTCAACACTTTCTCACAAGGCTTGCTTTGAAGCCTCACTTGCACTGGGAATTTCTCTGTGGGTGCCAACATGTTCTTCTCTCTGTCATCGCCGACTCAAGGGTTATGAGTTATCTTCCTTCTACATTGGCTGCTGCTATAATGATCCACGTTATTGAAGAGATTGAACCATTGAATGCTAGGGAGTACCGAAATCAGCTTCTTGGTTTACTCAGAAGTAGCGAGGAGCAAGTGAATGAGTGCTACAAACTGATGCTGGGACTATTAGTTTGCTGTGAAGGGATTCACAATCCTGGTCAGAGGCGCAAACGTTTCTCTGAGCCAAGTAGCCCTGATGGGGTCATTGATGCATCTTTCTGCTGTGAAAGTTCAAATGATTCATGGTCAGTGGCATCACTTTCTGTGGAGCCAGAGTTTAAGAGGAGGAAAGCTCAGGACCAGCAGATGCGTTTGCCTTCAGTGGATCGAGTGTCTATTGGTGTTCTAAATATTCCTCGTCAATAA 1026 0.4756 MSHPPSPSFLLCHEQHSSFQQHSPTLITTPSSSPSIFSDNHLFSQHDHLLSLLSKETATHFTPSPSHHVVRWISTLSHFHGFAPLTTVLAVNYFYRFVNRRSFQSEDKPWRTQLAAVACVSLAAKVEETRVPLLLELQVEESKFVFEANTIHTMELLVLSTLEWKMNPVTPICFFQHFLTRLALKPHLHWEFLCGCQHVLLSVIADSRVMSYLPSTLAAAIMIHVIEEIEPLNAREYRNQLLGLLRSSEEQVNECYKLMLGLLVCCEGIHNPGQRRKRFSEPSSPDGVIDASFCCESSNDSWSVASLSVEPEFKRRKAQDQQMRLPSVDRVSIGVLNIPRQ* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0157 341 CDD CYCLIN 68 159 IPR013763 -
Pvu2g0157 341 SUPERFAMILY Cyclin-like 48 167 IPR036915 -
Pvu2g0157 341 Pfam Cyclin, C-terminal domain 169 269 IPR004367 -
Pvu2g0157 341 Gene3D - 168 257 - -
Pvu2g0157 341 SUPERFAMILY Cyclin-like 150 264 IPR036915 -
Pvu2g0157 341 SMART Cyclin_C_2 169 297 IPR004367 -
Pvu2g0157 341 Gene3D - 57 167 - -
Pvu2g0157 341 Pfam Cyclin, N-terminal domain 61 167 IPR006671 -
Pvu2g0157 341 SMART cyclin_7 71 160 IPR013763 -
Pvu2g0157 341 PANTHER CYCLINS 26 323 IPR039361 -
Pvu2g0157 341 PANTHER CYCLIN-D3-2 26 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0157 Pvu-Chr2 1724756 1726646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0157 46 330 Core Cell Cycle Gene Families AT5G67260 46.711 8.18e-85 260
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0157 2 1724756 1726646 Pvu3g2475 3 46363155 46365135 ECH
Pvu9g0696 9 11553719 11555872 Pvu2g0157 2 1724756 1726646 ECH
Pvu1g0254 1 2226702 2228463 Pvu2g0157 2 1724756 1726646 ECH
Pvu2g0157 2 1724756 1726646 Pvu2g0157 2 1724756 1726646 ECH
Pvu2g0157 2 1724756 1726646 Pvu7g0392 7 3071377 3073726 PCT
Pvu3g2475 3 46363155 46365135 Pvu2g0157 2 1724756 1726646 PCT