Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2684 ATGATGGTGCTGGCAAATTCTGGTTCGGGGCTTCGGAAACAGGTTTTTCCGGTGAACTACGAGACGGAGCTGTCGCAGCGTCTGGTAGACGCGGCTTATTACGGCGACACCGACGCTGCGGTTGATTGCGTCGCCAATCCCTCGGTCGACGTTAACTTCGTCGGAACGGTATCGTTTAAGTCCAAGACGACGGAGATCGTGCTGCAGGACGAGTCGCCTCACCGAGTTAACTCGGCGTACGAGGAGTTCAAGACCGACCTCACCGCTCTGTTCCTGGCCGCGCACACAGGGAATTTAACACTCCTTAGGAAGCTTCTGAATGTTGGAGCTAATGTAAATATGAGAATGTTCCGGGGCTATGCCATAACAGCATCAGTGAGAGAAGGGCATCTAAAAGTGTTGGAGGTTCTTCTCAATGCTGGGGCATCACAACTTGCATGCGAAGAGGCTTTAATGGAAGCAAGCTATTTGGGGAGGGGCAGATTTGTTGAATTACTCATGCAATCCAACATGATTCGTCCTCAGGTTACAGTTCATGCCCTTGTCTCTGCTTGTTGCAGAGGCTTCGTTGAGGTTGTTGATGTACTCATCAAGCATGGAGTGGATGCCAATGCAATTGATAGGACTTTGCTTCAATCTTCAAAGCCATTTCTTCATGCTAATGTTGATTGCAATGCATTATTTGCTGCTGTGGTCAGCAGGCAGATTGATGTTGTTAGATTACTGTTGCAGGTTGGTGTAAGGCTTGACAAGAAGGTGAAACTGGGGGCTTGGTCCTGGGACACAGACACAGGAGAAGAATTTCGTGTAGGTGTTGGACTAGCTGAGGCCTATCCAATCACCTGGTGTGCTGTGGAGTATTTTGAATCCACTGGTGCTATATTGCATATGCTGCTCTGCCATCTCTCACCTAATACCTTACACAATGGGAGGAGTCTCTTGCACCATGCTATCATTTGCAACAACGAAAAAGCTGTAAATATACTTCTAAACAATGGTGCTGATGCAGAAGTGATGGTTCAAACCACTGAAGGAACCAATGAATACCCTATTCACATTGCTGCACGGCTTGGATCATGCAACATTCTTCAGTGCCTGATTAAAGGTGGTTGCAACTTGGATTCCCAAACAAAATGTGGAGATTCAGCACTGATGATCTGCACAAGGCACAAACATGAGAAGTGCCTTGGGGTCCTAGCATCAGCAGGTGCTGATCTGGGAATGGTAAATTCATCAGGTCACTGTGCAACTTCAACTGCAAACTTTGTTCAGTGGACCAAAGTCTATCAGAAAGTGATTTTGGATGTAATCAGAGCCGGGAAGGTTGTTAAATCAAGCAATGCTGCTAGATTCTCCGCTTTGTTATTTGCAACTCGTGCAAATGACATAGAGGGTTTGAAGAAACTCATTGAAGACGAAAACACCAATCTGAATGAGCAAAATGGCAACGGATTTTCTGCTGCTATGATAGCTGCTGTAGTAGGCAACGTGGAAGCTTTCAAGTTGCTTCTTTATGCAGGTGCTGACATGACTAAGCTTAAAAACAAATATGGTTTGACAGTGCTTAACGTGGTAGATGTGAGCCAAAACAGTGAAGTGTTCCACAAGGTGATGCTTGAATATGCACTTAAAAGTGGTGAAGGCGATGGTTCAACTGAAGCAAACCCTCTCCACCGTGCATGTTGCTATGGAGACACAAGTATTGTTCACAAACTACTAAAAGAAGGGTATGCAGTAAATGGTTTTGATGGTGAAGGACACACCCCTCTGATGTTAGCAGCAAGAGCATGCCGTGGTGAAATGTGTGAGCTTTTGATCTCACATGGAGCTAAATGTGATGTTCAAAACGAGAGACACGAGACACCCCTTTCACTTTCCAGAGAAAATGGTGCAGGAAATGATGCTGAACGTGTGATTTTGGATGAGCTAGCAAGAACACTGGTCTTGCGTGGAGCTCGTGTGAAGAAGCATACAAAGTGTGGCAAAGGTTCACCTCATGGTAAGTTACTACAGATGATTGGTGCTGCTGGAATCTTACGTTGGGGAAAATCAAGTAAGAGAAATGTGATTTGTAAAGAGGCTGAGGTTGGAGCAAGTGTGAAATTTCGATGGAATCGTAGGAGGAAGTTTGATGTTGAAGAACCAGGATTGTTCCATGTTGTTACGACAACAAAAGAGAAGCAGGTACATTTTGTGTGTGAAGGTGGTGTTGAAATGGCTGAGTTGTGGGTGAGGGGGATTAAATTAGTAACCAGAGAAGCCATTTCTGGTAGAAGAGCTCATAACGTTTGA 2292 0.4533 MMVLANSGSGLRKQVFPVNYETELSQRLVDAAYYGDTDAAVDCVANPSVDVNFVGTVSFKSKTTEIVLQDESPHRVNSAYEEFKTDLTALFLAAHTGNLTLLRKLLNVGANVNMRMFRGYAITASVREGHLKVLEVLLNAGASQLACEEALMEASYLGRGRFVELLMQSNMIRPQVTVHALVSACCRGFVEVVDVLIKHGVDANAIDRTLLQSSKPFLHANVDCNALFAAVVSRQIDVVRLLLQVGVRLDKKVKLGAWSWDTDTGEEFRVGVGLAEAYPITWCAVEYFESTGAILHMLLCHLSPNTLHNGRSLLHHAIICNNEKAVNILLNNGADAEVMVQTTEGTNEYPIHIAARLGSCNILQCLIKGGCNLDSQTKCGDSALMICTRHKHEKCLGVLASAGADLGMVNSSGHCATSTANFVQWTKVYQKVILDVIRAGKVVKSSNAARFSALLFATRANDIEGLKKLIEDENTNLNEQNGNGFSAAMIAAVVGNVEAFKLLLYAGADMTKLKNKYGLTVLNVVDVSQNSEVFHKVMLEYALKSGEGDGSTEANPLHRACCYGDTSIVHKLLKEGYAVNGFDGEGHTPLMLAARACRGEMCELLISHGAKCDVQNERHETPLSLSRENGAGNDAERVILDELARTLVLRGARVKKHTKCGKGSPHGKLLQMIGAAGILRWGKSSKRNVICKEAEVGASVKFRWNRRRKFDVEEPGLFHVVTTTKEKQVHFVCEGGVEMAELWVRGIKLVTREAISGRRAHNV* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2684 763 Coils Coil 460 483 - -
Pvu1g2684 763 ProSiteProfiles Ankyrin repeat region circular profile. 309 338 - -
Pvu1g2684 763 Gene3D - 305 427 IPR036770 -
Pvu1g2684 763 ProSiteProfiles Ankyrin repeat profile. 552 584 IPR002110 GO:0005515
Pvu1g2684 763 ProSiteProfiles Ankyrin repeat profile. 85 117 IPR002110 GO:0005515
Pvu1g2684 763 ProSiteProfiles Ankyrin repeat region circular profile. 585 617 - -
Pvu1g2684 763 Pfam Ankyrin repeat 309 336 IPR002110 GO:0005515
Pvu1g2684 763 Pfam Ankyrin repeat 347 374 IPR002110 GO:0005515
Pvu1g2684 763 ProSiteProfiles Ankyrin repeat region circular profile. 85 115 - -
Pvu1g2684 763 Pfam Ankyrin repeats (3 copies) 540 616 IPR002110 GO:0005515
Pvu1g2684 763 Gene3D - 538 670 IPR036770 -
Pvu1g2684 763 Gene3D - 175 262 IPR036770 -
Pvu1g2684 763 ProSiteProfiles Ankyrin repeat profile. 585 617 IPR002110 GO:0005515
Pvu1g2684 763 ProSiteProfiles Ankyrin repeat profile. 309 341 IPR002110 GO:0005515
Pvu1g2684 763 Gene3D - 431 537 IPR036770 -
Pvu1g2684 763 SUPERFAMILY Ankyrin repeat 28 256 IPR036770 -
Pvu1g2684 763 ProSiteProfiles Ankyrin repeat profile. 483 515 IPR002110 GO:0005515
Pvu1g2684 763 PANTHER ANKYRIN REPEAT-CONTAINING 9 757 - -
Pvu1g2684 763 ProSiteProfiles Ankyrin repeat profile. 346 378 IPR002110 GO:0005515
Pvu1g2684 763 Gene3D - 17 174 IPR036770 -
Pvu1g2684 763 PANTHER ANKYRIN DOMAIN PROTEIN 9 757 - -
Pvu1g2684 763 SUPERFAMILY Ankyrin repeat 308 638 IPR036770 -
Pvu1g2684 763 SMART ANK_2a 176 205 IPR002110 GO:0005515
Pvu1g2684 763 SMART ANK_2a 117 146 IPR002110 GO:0005515
Pvu1g2684 763 SMART ANK_2a 309 338 IPR002110 GO:0005515
Pvu1g2684 763 SMART ANK_2a 483 512 IPR002110 GO:0005515
Pvu1g2684 763 SMART ANK_2a 449 479 IPR002110 GO:0005515
Pvu1g2684 763 SMART ANK_2a 85 114 IPR002110 GO:0005515
Pvu1g2684 763 SMART ANK_2a 379 408 IPR002110 GO:0005515
Pvu1g2684 763 SMART ANK_2a 585 614 IPR002110 GO:0005515
Pvu1g2684 763 SMART ANK_2a 346 375 IPR002110 GO:0005515
Pvu1g2684 763 SMART ANK_2a 222 251 IPR002110 GO:0005515
Pvu1g2684 763 SMART ANK_2a 552 581 IPR002110 GO:0005515
Pvu1g2684 763 ProSiteProfiles Ankyrin repeat region circular profile. 483 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2684 Pvu-Chr1 51538244 51543323 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2684 334 535 Ion Channels AT2G25600 26.667 4.64e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2684 - - gmx:100795638 1330.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2684 1 51538244 51543323 Pvu1g2684 1 51538244 51543323 ECH