Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2594 ATGGTGCTGATCAACGAAGAAATTGACCCCTACATCACTGAAGAAGAGAACCAAGATGAGAGCATCGACTATGACCAGCTGAAAAAACGCATGTGGAAGGATAGGATTCTGCTACAGAAGCTGAAGGAGAAGCGTGAGAAACAAGAGCCGGACAAAGAAGCAAAAATAGAGGCATCGAGAAGGAAGAAGATGTCAAGAGCACAAGACTTGGTCCTCAAGTACATGGTGAAGATCATGGAAGTCTGCAACGCCCAAGGTTTTGTTTATGGCATCATCCCAGAAAAGGGAAAGCCCGTGTCTGGTTCCTCCGACAGCTTGCGAGAGTGGTGGAAGGACCAAATCCGCTTTGACCAAAGCGCCCCCAGTGCAATCTTGAATTACTTGCCACTCTTGGAAAAAGACAAGATGGATATAACCTCCTATATTCACCTCCTCCAAGACTTGCAAGACTCTACTTTGGGTTCTCTGCTATCTGCTCTGCGGCAACACTGTGTCCCTCCACAAAGAAAGTTCCCTTTGGAGAGAGGCTTATCTCCCCCTTGGTGGCCCACCGGGGAGGAACTCTGGTGGGGTGAGCAAGGCCTTCTGGCCCAAGAACATGGGGCCCCTCCTTATAGGAAGCCCCATGACTTGAAAAAGGCCTGGAAAGTTTCTGTTCTGGCTGCGATTATCAAACACATATCCCCTGATTTTGATAAACTCAGAAGGTTGGTGACTCAGTCGAAAACCTTGCAAGATAAAATGACAGCCAGGGATAGTTCGACTTGGTCCAAAGTCATGAACCAAGAAGAGGTTTTACTAGGAATAACTGGCAAGTTATCTCTTTCAAATGAAGATGTTGAGAACCATGAAGAGGGAGAAGGCTCTGGCTCTGACTCTGCTCAACTTTTGAAGAGGAAGGTCTCTTTTGGTAGTGGCAGTGAGGATGATAAGTTATATGCATGTCAAAACGTTGAGTGTCCACAGAGCAAGTTGTCTATGGGGTTTGTGGACAGGAACGCGAGGTTGGACCATGAAGCTCTCTGTGCCTACCGCATAGAGGATAGCTACCTTCCTTTTCACCGTTATCTCTCCAATGAAGCATCACCAATCACGAGTGTAGATGATTGGATGAATGTGGCAATTCAGAATGATGCGAAGGTGGTGGAGGCTGCTGGTGGGAGTGGAACATTGGAAGATAACGCTTGTTACTGGCTTAATGGTGTTGAAAATCTTGAATTGGAAGCTGCACTAGAGATGTTACTCAACGATAACGAGGACTTTGATCAAAACCCAGTTCAGATTCCGCAGGTTCAAGAGGATGCAACCTCAATTTGGGACTTGCCATGGCATCCATCCCAATAG 1344 0.4688 MVLINEEIDPYITEEENQDESIDYDQLKKRMWKDRILLQKLKEKREKQEPDKEAKIEASRRKKMSRAQDLVLKYMVKIMEVCNAQGFVYGIIPEKGKPVSGSSDSLREWWKDQIRFDQSAPSAILNYLPLLEKDKMDITSYIHLLQDLQDSTLGSLLSALRQHCVPPQRKFPLERGLSPPWWPTGEELWWGEQGLLAQEHGAPPYRKPHDLKKAWKVSVLAAIIKHISPDFDKLRRLVTQSKTLQDKMTARDSSTWSKVMNQEEVLLGITGKLSLSNEDVENHEEGEGSGSDSAQLLKRKVSFGSGSEDDKLYACQNVECPQSKLSMGFVDRNARLDHEALCAYRIEDSYLPFHRYLSNEASPITSVDDWMNVAIQNDAKVVEAAGGSGTLEDNACYWLNGVENLELEAALEMLLNDNEDFDQNPVQIPQVQEDATSIWDLPWHPSQ* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2594 447 Pfam Ethylene insensitive 3 26 264 IPR006957 GO:0005634
Pvu1g2594 447 Coils Coil 404 424 - -
Pvu1g2594 447 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 3 447 IPR006957 GO:0005634
Pvu1g2594 447 PANTHER ETHYLENE INSENSITIVE PROTEIN 3 447 - -
Pvu1g2594 447 Gene3D - 135 271 IPR023278 GO:0003700|GO:0005634
Pvu1g2594 447 Gene3D - 54 129 IPR023278 GO:0003700|GO:0005634
Pvu1g2594 447 SUPERFAMILY DNA-binding domain of EIN3-like 142 266 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2594 Pvu-Chr1 50879084 50880427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2594 6 374 EIL Transcription Factor Family AT5G10120 52.699 3.99e-132 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Pvu1g2594 EIN3 7.5e-112 No_clan