Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1400 ATGGCCGAATATTTTCTCTTCAGCATCGCAGAGTCACTCATAGCAAAACTTGCTTCTCATGCTTTTCAAGAAGCTTCTCGATTGGTGGGTTTATATGACAATCTTCGAGACCTTACAAAGACTCTCTCTTTAGTCAAGGCTGTGCTGTTAGATGCTCAGCAAAAGCAGGAGCACAACCATCAGCTCCGCGAATGGCTCACTCAGCTCAAAATTGTCTTCTCCGATGCCGAAGATCTTTTGGATGAATTTGAGTGCCAAACACTGCGAAATAAAGTGGTCAAAGCTCATGGTAGCACCAAAGACAAGGTAAGTCACTTCTTCTCAACCTCTAATCCACTTCTCTTTCGTTACCAAATGGCTCAACAAATTAAAGATATCAGCAACAGACTAGACAAGGTTGCAGCTGATAGGCATAAATTTAGTCTTCAAATAATTGATGTTGACACACGTGTTGTTCATCGGAGAGATATGACACACTCCCGTGTTAATGATTCGGATGTGATAGGAAGGAAACACGATAAAGAAAAGATCATAGAGCTTTTGATGCCGCAGAATTCTAATGATGATGATGATACAAGTCTTTTCGTTATCCCCATTGTGGGTATTGGAGGCTTGGGAAAGACTACGCTTGCAAAGTTTGTGTTCAATGACAGCAGGATCCAGGAGTGTTTTCCAATGAAGATGTGGGTGTGTGTTTCTGATGACTTTGACATTAAACAACTCATTATCAAAATCATCAATTCTGCCAATGATCAAGATGCTCCTCCTCACCAACAGAATTTGAACATGTTGGATCTTGAGCAATTGCAAAATCAACTGAAAAACAAACTTTCCTCTCAAAATTTCTTACTCGTCTTAGACGATGTATGGAACGAAGACCGTGTTAAATGGGTGGAGCTGAGAAATTTAATCCAAAGTGCAGCAGGAAGTAAAATCCTTGTGACCACACGTAGTCATTCAATTGCTTCCATGATGGGCACAGTTACCTCTCACATTTTAGAAGGTCTTTCTGAAGAGGATTCATTGTCTCTTTTTGTCAAGTGGGCATTTAAAGAAGGAGAAGAGGAAAATCATCCTCACTTAGTAAATATTGGGAGAGAAATTGTGAAAAAATGCAGAGGGGTTCCATTGGCAGTGAGAACATTAGGGAGTTTACTATTCTCGAAATTTGAGGCCAGTGAATGGGAATATGTGAGTGAGAATGAAATTTGGAATTTGCCTCAGAAAAAGGATGACATTTTACCTGCCCTTAAATTAAGTTATGATCTCATGCCGTCCTATTTGAGACAATGTTTTGTAATGCTTTCTCTTTACCCAAAGGACTACGAAATTAATAGTTATGAAATAAGTTCGCTTTGGGGGGCACTTGGACTCATTGCAGTACCAAAAAAGAACAGAACACTTGAAGATGTGGCCAATAAATATTTGCATGAACTTTTGTCAAGATCTTTTCTTCAAGATTTTACAAACTTTGGCACGGTTTATAGTTTTACAATACATGATTTGGTGCATGATCTCGCTCTATTTGTTGCAAAGGATGACTGTCTATATGTAAGTTCCAATATTCAAAATATTCCAGATAATGTTCGGCATCTGTCTTTTGCTGAAAGCAGTTTGTTTAACAATTTATACCACAAAAAATCGGTAGCTATGAGAACCATACTGTTTCGATACGGTTCAAAAGAAATCAACAGTGAAGCTTTAATAAATACTTGTGTGTCAAAGTTCAAATATTTGCGAGTTTTGAATTTATGGGCTTCGACAATGGAGACTTTGCCCCGTACCATTGCTAAGTTGAAACATTTGAGATGTTTGAACATTAGCCAAAATATCAACATTAAGAGACTCCCGGAGTCTATTTGCAAGCTGCAAAGTCTGCAAGTGTTGAGGCTTGGCAGATGCCTGCAGCTGGAAGCAATGCCCAAAGGATTAAGAAAATTGATTAGTCTCCGTGAGTTGGAGTTCAGTACAAAGCAATCTATTTTGCCTGACAATGACATTGCTAGTCTGGGCGATCTTGCAAATCTATGTATTGAATCAAGCCCTAATTTGGAGTCTATATTCGGAGGTGTGCAATTCCCTGTTCTTAAAGGATTGACTGTTATTGACTGTCAGAGTCTAAAGTCTTTTCGGCTGGATGGTAATTTTTTTCCTGAATTAGAAACATTGGGTGGCAACCACTTCGAAGAACAAAGCCACAAGCTAAAGTTAAAAACTGTTTTATTTTCAAATTTATCACAGCTGGTGGCCTTGCCTAAATGGCTTCAAGAAGCTGCCAACTCCTTACAGTGCTTGATAATTACAGATTGTGATAATATTGAAACACTTCCAGATTGGTTAACAACTATGACTAACCTGAAAACACTTTCTATAAAGTCTTGTCCAAATTTGATATCTCTCCCAGATAACATCCATTACCTTACTGCACTTGAAACTTTGATGATTCAAGGTTGTCCTGACTTATGTGAAAAATATCAACCCCATGTTGAAGAGTTTTGGCCCAAAATATCACACATAAAAAACATTTACATTGATGAACCAGAAGAGCCTGAGAAAAATTAG 2562 0.3833 MAEYFLFSIAESLIAKLASHAFQEASRLVGLYDNLRDLTKTLSLVKAVLLDAQQKQEHNHQLREWLTQLKIVFSDAEDLLDEFECQTLRNKVVKAHGSTKDKVSHFFSTSNPLLFRYQMAQQIKDISNRLDKVAADRHKFSLQIIDVDTRVVHRRDMTHSRVNDSDVIGRKHDKEKIIELLMPQNSNDDDDTSLFVIPIVGIGGLGKTTLAKFVFNDSRIQECFPMKMWVCVSDDFDIKQLIIKIINSANDQDAPPHQQNLNMLDLEQLQNQLKNKLSSQNFLLVLDDVWNEDRVKWVELRNLIQSAAGSKILVTTRSHSIASMMGTVTSHILEGLSEEDSLSLFVKWAFKEGEEENHPHLVNIGREIVKKCRGVPLAVRTLGSLLFSKFEASEWEYVSENEIWNLPQKKDDILPALKLSYDLMPSYLRQCFVMLSLYPKDYEINSYEISSLWGALGLIAVPKKNRTLEDVANKYLHELLSRSFLQDFTNFGTVYSFTIHDLVHDLALFVAKDDCLYVSSNIQNIPDNVRHLSFAESSLFNNLYHKKSVAMRTILFRYGSKEINSEALINTCVSKFKYLRVLNLWASTMETLPRTIAKLKHLRCLNISQNINIKRLPESICKLQSLQVLRLGRCLQLEAMPKGLRKLISLRELEFSTKQSILPDNDIASLGDLANLCIESSPNLESIFGGVQFPVLKGLTVIDCQSLKSFRLDGNFFPELETLGGNHFEEQSHKLKLKTVLFSNLSQLVALPKWLQEAANSLQCLIITDCDNIETLPDWLTTMTNLKTLSIKSCPNLISLPDNIHYLTALETLMIQGCPDLCEKYQPHVEEFWPKISHIKNIYIDEPEEPEKN* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1400 853 Gene3D - 420 508 IPR036388 -
Pvu1g1400 853 PANTHER DISEASE RESISTANCE PROTEIN RP 741 816 IPR044974 GO:0006952
Pvu1g1400 853 PANTHER DISEASE RESISTANCE PROTEIN RP 2 660 IPR044974 GO:0006952
Pvu1g1400 853 PANTHER OS01G0808000 PROTEIN 741 816 - -
Pvu1g1400 853 PANTHER OS01G0808000 PROTEIN 2 660 - -
Pvu1g1400 853 Gene3D - 149 332 IPR027417 -
Pvu1g1400 853 CDD RX-CC_like 8 134 IPR038005 -
Pvu1g1400 853 Gene3D - 10 124 - -
Pvu1g1400 853 Gene3D Ribonuclease Inhibitor 546 846 IPR032675 -
Pvu1g1400 853 Gene3D - 335 419 IPR042197 -
Pvu1g1400 853 SUPERFAMILY L domain-like 499 840 - -
Pvu1g1400 853 Pfam Rx N-terminal domain 11 98 IPR041118 -
Pvu1g1400 853 PRINTS Disease resistance protein signature 196 211 - -
Pvu1g1400 853 PRINTS Disease resistance protein signature 276 290 - -
Pvu1g1400 853 PRINTS Disease resistance protein signature 372 386 - -
Pvu1g1400 853 PRINTS Disease resistance protein signature 781 797 - -
Pvu1g1400 853 Pfam Leucine rich repeat 578 634 IPR001611 GO:0005515
Pvu1g1400 853 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 435 IPR027417 -
Pvu1g1400 853 Pfam NB-ARC domain 171 422 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1400 Pvu-Chr1 37917813 37920413 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1400 1 37917813 37920413 Pvu1g1400 1 37917813 37920413 ECH