Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1399 ATGGCCGAATCATTTCTCTTCAGCATCGCAGAGTCGCTCATAGCAAAGATTGCTTCTCATGCTTTTCAAGAAGCTTCTCGATTGGTGGGTTTATATGACAATCTTCGAGATCTTATAGAGACTCTCTCTTTAGTCAAGGCTGTGCTGTTAGATGCTCAGCAAAAGCAGGAGCACAACCATCAGCTCAGCCAATGGCTCACTCAGCTCAAAACTGTCTTCTCCGATGCCGAAGATCTTTTGGATGAATTTGAGTGCCAAACACTGCGAAAGAAAGTGGTCAAAGCTCATGGTAGCACCAAAGACAAGGTAAGTCACTTCTTCTCAACCTCTAATCCACTTCTCTTTCGTTACCAAATGGCTCAACAAATTAAAGATATCAGCAACAGACTAGACAAGGTTGCAGCTGATAGGCATAAATTTAGTCTTCAAATAATTGATGTTGACACACGTGTTGTTCATCGGAGAGATATGACACACTCCCGTGTTAATGATTCGGATGTGATAGGAAGGAAACACGATAAAGAAAAGATCATAGAGCTTTTGATGCAACAAAATTCTAATGATGATGATACAAGTCTTTCCGTTATCCCCATTGTGGGGATTGGAGGCTTGGGAAAGACTACGCTTGCAAAGTTTGTGTTCAATGACAGCAGAATCCAGGAGTGTTTTCCTTTGAAGATGTGGGTGTGTGTTTCTGATGACTTCGACATTAAACAACTCATTATCAAAATCATCAATTCTGCCAGTGATCAAGATGCTCCTCCTCACCAACAGAATTTGAACATGTTGGATCTGGAGCAACTGCAAAATCAACTGAAAAACAAACTTTGCGGTCAAAAATTCTTACTCGTCTTAGACGATGTATGGAACGAAGACCGTGTTAAATGGGTTGAGCTGCGGAATCTAATCCAAGTAGGTGCAGCAGGAAGTAAAATTTTAGTGACCACACGTAGTCATTCAATTGCTTCCATGATGGGTTCAGTTCCCTCTCACATTTTAGAAGGTCTTTCTGAAGAGGATTCATTGTCTCTCTTTGTCAAATGGGCATTTAAGGGAGGTGAAGAGGAAAAACATCCTTACTTAGTAAATATTGGGAGAGAAATTGTGAAAAAATGCAGAGGGGTTCCTTTGGCAGTGAGAACATTAAGTAGTTTACTATTCTCGAAATTTGAGGCAAATGAATGGGAATATGTGAGAGACAATGAAATTTGGAATTTGCCTCAGAGAAAAGGTGACATTTTACCTGCTCTTAAATTAAGTTACGATCTCATGCCGTCCTATTTGAGGCAATGTTTTGCATTGTTTTCCCTTTACCCAAAGGATTATGACTTCACTAGTGTTGAAATGACTTCGCTTTGGGGGGCACTTGGACTCATTGCAGTACCAATAAAGAACAGGACACTTGAAGATGTGGCCAATCAATATTGGCATGAACTTCTGTCAAGATCTTTTCTTCAAGATTTTACAAACTTTGGCACTGTTTATTGTTTTAGAATACATGATTTGGTGCATGATCTCGCTCTATTTGTTGCAAAGGATGAGTGTCTACATGTAAGTTCCAACATTCAAAGTATTCCAGATAAGGTTCGACATGTGTCTTTTGGTGAAAGCAGATTGTTTGGCAATTTAGTCAACAAAAAATCAGCAGCTGTGAGAACCGTACTGTTTCCAAATGGTGCAGCAGATGCCAACGGAGAAGCATTACTAAATATGTGTCTGTCAAAGTTCAAATGCTTGCGTGTTTTGAATTTACGTAGTGCGACATTCGAGACTTTGCCTCGTTCCATTGCTAAGTTGAAACATTTGAGATATTTGGACATTAGCAAAAATCTCAACATTAAGAGACTCCCCGAGTCTATTTGCAAACTCCAAAGTTTGCAAGGGTTGATGCTTGACGGATGCATGGAGCTGGAAGCATTGCCCAAAGGATTGAGAAAGTTGATCAGTCTCCGTTATTTGGAGTTTAGCATAAAGCAAACTGTTTTGCCTTTGAATGAGATTGCCAAATTGGGCTCTCTTGAAGTCTTGAATGTGGAATCATGCTATAATGTGGAGTCCATCTTTGGAGAGGTGAAATTCCCTGTTCTTAAAGTATTGAGTGTTATTGACTGTGAGAGTCTAAAGTCCATTTTGCTAGATAGCAAAAATTTTCCTCAATTAGAATCATTGATCGTTGATGGCTGCGGTAATTTGGACTTGGAACTATGGAAGGGCAACCACCTTGAAGAACAAAGCCACAAGCTAAAGTTAAAAACTGTTCTATTTTCAAATTTTTCGCAGCTGGTGGCCTTGCCTAAATGGCTTCAAGAAGCTGCCAACTCCTTACAGTGCTTGTTAATTTCATATTGCTACAATATTGAAACACTTCCAGATTGGTTAACAACTTTGACTCATCTGAAAACACTTTCTATAATGTCTTGTCCAAATTTGGTATCTCTGTCAGATAACATCCATCACCTCGCTGCACTTGAAAGTTTGAGGATTGAAGGTTGTCCTGACTTATATGAAAAATATCAACCCCATGTTGGAGAGTTTTGGCCCAAAATTTCACACATAAAAAACATTTGCATTGATTAA 2577 0.3939 MAESFLFSIAESLIAKIASHAFQEASRLVGLYDNLRDLIETLSLVKAVLLDAQQKQEHNHQLSQWLTQLKTVFSDAEDLLDEFECQTLRKKVVKAHGSTKDKVSHFFSTSNPLLFRYQMAQQIKDISNRLDKVAADRHKFSLQIIDVDTRVVHRRDMTHSRVNDSDVIGRKHDKEKIIELLMQQNSNDDDTSLSVIPIVGIGGLGKTTLAKFVFNDSRIQECFPLKMWVCVSDDFDIKQLIIKIINSASDQDAPPHQQNLNMLDLEQLQNQLKNKLCGQKFLLVLDDVWNEDRVKWVELRNLIQVGAAGSKILVTTRSHSIASMMGSVPSHILEGLSEEDSLSLFVKWAFKGGEEEKHPYLVNIGREIVKKCRGVPLAVRTLSSLLFSKFEANEWEYVRDNEIWNLPQRKGDILPALKLSYDLMPSYLRQCFALFSLYPKDYDFTSVEMTSLWGALGLIAVPIKNRTLEDVANQYWHELLSRSFLQDFTNFGTVYCFRIHDLVHDLALFVAKDECLHVSSNIQSIPDKVRHVSFGESRLFGNLVNKKSAAVRTVLFPNGAADANGEALLNMCLSKFKCLRVLNLRSATFETLPRSIAKLKHLRYLDISKNLNIKRLPESICKLQSLQGLMLDGCMELEALPKGLRKLISLRYLEFSIKQTVLPLNEIAKLGSLEVLNVESCYNVESIFGEVKFPVLKVLSVIDCESLKSILLDSKNFPQLESLIVDGCGNLDLELWKGNHLEEQSHKLKLKTVLFSNFSQLVALPKWLQEAANSLQCLLISYCYNIETLPDWLTTLTHLKTLSIMSCPNLVSLSDNIHHLAALESLRIEGCPDLYEKYQPHVGEFWPKISHIKNICID* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1399 858 CDD RX-CC_like 2 134 IPR038005 -
Pvu1g1399 858 Pfam NB-ARC domain 171 401 IPR002182 GO:0043531
Pvu1g1399 858 PRINTS Disease resistance protein signature 195 210 - -
Pvu1g1399 858 PRINTS Disease resistance protein signature 275 289 - -
Pvu1g1399 858 PRINTS Disease resistance protein signature 372 386 - -
Pvu1g1399 858 PRINTS Disease resistance protein signature 597 613 - -
Pvu1g1399 858 Gene3D - 149 330 IPR027417 -
Pvu1g1399 858 Gene3D - 335 419 IPR042197 -
Pvu1g1399 858 Pfam Rx N-terminal domain 11 98 IPR041118 -
Pvu1g1399 858 Gene3D - 10 124 - -
Pvu1g1399 858 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 434 IPR027417 -
Pvu1g1399 858 PANTHER DISEASE RESISTANCE PROTEIN RP 6 751 IPR044974 GO:0006952
Pvu1g1399 858 Pfam Leucine rich repeat 579 634 IPR001611 GO:0005515
Pvu1g1399 858 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 751 - -
Pvu1g1399 858 Gene3D - 420 508 IPR036388 -
Pvu1g1399 858 Gene3D Ribonuclease Inhibitor 559 855 IPR032675 -
Pvu1g1399 858 SUPERFAMILY L domain-like 498 837 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1399 Pvu-Chr1 37888324 37891198 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1399 1 37888324 37891198 Pvu1g1399 1 37888324 37891198 ECH