Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1398 ATGGCCGAATCATTTCTCTTCACCATCGCAGAGTCACTCATAACAAAGATTGCTTCTCATGCTTTTCAAGAAGCTTCTCGATTGGTGGGTTTATATGACAATCTTCCAGACCTTACAAAGACTCTCTCTTTAGTCAAGGCTGTGTTGTTAGATGCTCAGCAAAAGCAGGAGCACAACCATCAGCTGCGCGAATGGCTCACTCAGCTCAAAATTGTCTTCTCCGATGCCGAAGATCTTTTGGATGAATTTGAGTGCCAAACACTGCGAAACAAAGTGGTCAAAGCTCACGGTACCACCAAAGACAAGGTAAGTCACTTCTTCTCAAGCTCTAATCCACTTCTCTTTCGTTACAAAATGGCTCAACAAATTAAAGATATCAGCAACAGACTAGACAAGGTTGCAGCTGATAGGCACAAATTTAGTCTTCAAATAACTGATGTTGACACACGTGTTGTGCATCGGAGAGATATGACACATTCCCGTGTGAGTGATTCAGATGTGATAGGAAGGAAACAGGATAAAGAAAAGATCATAGATCTTTTGATACTGCAAAATTCTAATGATGGTGATACAAGTCTTTCTGTTATCCCTCTTGTGGGGATGGGAGGCTTGGGAAAGACTACGCTTGCAAAGTTTGTGTTCAATGACAGCAGGATCCAGGAGTGTTTTCCGTTGAAGATGTGGGTGTGTGTTTCTGATGACTTTGACATTAAACAACTCATTATCAAAATCATCAATTCAGCCAATGATCAATATGCTCCTCCTCACCAACAAAACTTGAACATGTTGGATCTGGAGCAACTGCAAAATCAGCTGAAAAACAAAATTTCCGGTAAAAAATTCTTACTCGTCTTAGACGATGTATGGAACGAAGATCGTGTTAAATGGGTTGAGCTGAGGAATTTAATCCAAGTAAGTGCAGCAGGAAGTAAAATCCTTGTGACCACACGTAGTCATTCAATTGCTTCCATGATGGGTTCAGTTCCCTCTCACATTTTAGAAGGTCTTTCTGAGGAGGATTCATTGTCTCTCTTTGTCAAATGGGCATTTAAAGAAGGAGAAGAGGAAAAGCATGATCACCTAGTAAATATTGGGAGAGAAATTGTGAAAAAAAGCAGAGGGGTCCCATTGGCAGTGAGAACATTAGGCAGTTTATTATTCTCGAAGTTTGAGGCCAGTGAATGGGAATATGTGAGTGAGAATGAAATTTGGAATTTGCCTCACGAAAAGGATGACATTTTACCTGCCCTTAAATTAAGTTATGATTTTATGCCGTCCTATTTGAGACAATGTTTTGCAATGTTTTCCCTTTTCCCAAAGGATTACGAAATTAATAGTTATGAAATAAGTTCGCTTTGGGGGGCACTTGGACTCATTGCAGTACCAAAAAAGAACAGAACACTTGAAGATGTGGCCAATAAATATTTGCATGAACTTTTGTCAAGATCTTTTCTTCAAGATTTTACAAACTTTGGCACGGTTTATAGTTTTACAATACATGATTTGGTGCATGATCTCGCTCTATTTGTTGCAAAGGATGACTGTCTATATGTAAGTTCCAATATTCAAAATATTCCAGATAATGTTCGGCATCTGTCTTTTGCTGAAAGCAGTTTGTTTAACAATTTATACCACAAAAAATCGGTAGCTATGAGAACCATACTGTTTCGATACGGTTCAAAAGAAATCAACAGTGAAGCTTTAATAAATACTTGTGTGTCAAAGTTCAAATATTTGCGAGTTTTGAATTTATGGGCTTCGACAATGGAGACTTTGCCCCGTACCATTGCTAAGTTGAAACATTTGAGATATTTGGACATTAGCCAAAATCTCAACATTAAGAGACTCCCGGAGTCTATTTGCAAGCTGCAAAGTCTGCAAGTGTTGAAGCTTGAGGAATGCAAAGAGCTGGAAGCAATGCCCAAAGGATTAAGAAAGTTGATCAGTCTCCGTCATTTAGAGTTCAGTACTAAGCAATCTATTTTGCCTGACAATGACATTGCTAGTCTGGGCAATCTTGCAAATCTGTCTATTACATTAAGCCCTAATTTGGAGTCTATCTTTGGAGGTGTGAAATTCCCTATTCTTAAAGTATTGAGTATTTATCATTGTCAGAGTCTAATGTCTTTTCGGCTGGATGGTAAATTTTTTCCTGAATTAGAAACATTGAGTGTTGAATCCTGCGATAATTTGGACTTGGAACTGTGGAAGGGCAACCACTTTGAAGAACAAAGCCACAAGCTAAAGTTAAAATCTGTTCGATTTTCAAATTTATCACAGTTGGTGGCCTTGCCTAAATGGCTTAAAGAAGTTGCCAACTCCTTACAGTGCTTGGTAGTTGAAAATTGTGATAATATTGAAACACTTCCAGATTGGTTAACAACTCTGATTGACCTGAAAACACTTTTTATAAAGTCTTGTCCAAATTTGGTATCTCTCCCCGATAACATCCATTACCTTACTACAATTGAAACTTTGATAATTCAAGGTTGTCCTGACTTATGTGAAAAATATCAACCCCATGTTGGGGAGTTTTGGCCCAAAATTTCACACATAAAAAACATTGTCATTGATGAACCATAA 2583 0.3821 MAESFLFTIAESLITKIASHAFQEASRLVGLYDNLPDLTKTLSLVKAVLLDAQQKQEHNHQLREWLTQLKIVFSDAEDLLDEFECQTLRNKVVKAHGTTKDKVSHFFSSSNPLLFRYKMAQQIKDISNRLDKVAADRHKFSLQITDVDTRVVHRRDMTHSRVSDSDVIGRKQDKEKIIDLLILQNSNDGDTSLSVIPLVGMGGLGKTTLAKFVFNDSRIQECFPLKMWVCVSDDFDIKQLIIKIINSANDQYAPPHQQNLNMLDLEQLQNQLKNKISGKKFLLVLDDVWNEDRVKWVELRNLIQVSAAGSKILVTTRSHSIASMMGSVPSHILEGLSEEDSLSLFVKWAFKEGEEEKHDHLVNIGREIVKKSRGVPLAVRTLGSLLFSKFEASEWEYVSENEIWNLPHEKDDILPALKLSYDFMPSYLRQCFAMFSLFPKDYEINSYEISSLWGALGLIAVPKKNRTLEDVANKYLHELLSRSFLQDFTNFGTVYSFTIHDLVHDLALFVAKDDCLYVSSNIQNIPDNVRHLSFAESSLFNNLYHKKSVAMRTILFRYGSKEINSEALINTCVSKFKYLRVLNLWASTMETLPRTIAKLKHLRYLDISQNLNIKRLPESICKLQSLQVLKLEECKELEAMPKGLRKLISLRHLEFSTKQSILPDNDIASLGNLANLSITLSPNLESIFGGVKFPILKVLSIYHCQSLMSFRLDGKFFPELETLSVESCDNLDLELWKGNHFEEQSHKLKLKSVRFSNLSQLVALPKWLKEVANSLQCLVVENCDNIETLPDWLTTLIDLKTLFIKSCPNLVSLPDNIHYLTTIETLIIQGCPDLCEKYQPHVGEFWPKISHIKNIVIDEP* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1398 860 Gene3D - 420 508 IPR036388 -
Pvu1g1398 860 SUPERFAMILY L domain-like 499 853 - -
Pvu1g1398 860 CDD RX-CC_like 2 134 IPR038005 -
Pvu1g1398 860 PRINTS Disease resistance protein signature 195 210 - -
Pvu1g1398 860 PRINTS Disease resistance protein signature 275 289 - -
Pvu1g1398 860 PRINTS Disease resistance protein signature 372 386 - -
Pvu1g1398 860 PRINTS Disease resistance protein signature 621 637 - -
Pvu1g1398 860 Gene3D - 335 419 IPR042197 -
Pvu1g1398 860 Gene3D Ribonuclease Inhibitor 546 856 IPR032675 -
Pvu1g1398 860 Pfam Leucine rich repeat 578 634 IPR001611 GO:0005515
Pvu1g1398 860 Pfam Rx N-terminal domain 11 98 IPR041118 -
Pvu1g1398 860 Gene3D - 10 124 - -
Pvu1g1398 860 PANTHER DISEASE RESISTANCE PROTEIN RP 2 659 IPR044974 GO:0006952
Pvu1g1398 860 PANTHER DISEASE RESISTANCE PROTEIN RP 697 827 IPR044974 GO:0006952
Pvu1g1398 860 Gene3D - 149 330 IPR027417 -
Pvu1g1398 860 Pfam NB-ARC domain 171 422 IPR002182 GO:0043531
Pvu1g1398 860 PANTHER OS01G0808000 PROTEIN 2 659 - -
Pvu1g1398 860 PANTHER OS01G0808000 PROTEIN 697 827 - -
Pvu1g1398 860 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 434 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1398 Pvu-Chr1 37847351 37849933 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1398 1 37847351 37849933 Pvu1g1398 1 37847351 37849933 ECH