Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1370 ATGGGTGAACGAAGTCATTCAGATGCTCAGTTAGATACTATTTCTAGTGGGACTGAGGAACACTTGATCTCTCGGTTACCTAAAGAATGTAAGATTGGAGCCATTACTTTGGATGAAAGTGATGATGTTTATCCTGTGCCACGGCCTGGAATGATCTTTAGGTCAGAACCTGAGGCAAGATTGTATTACACAAGATATGCCAACCAAATGGGCTTCAACGTCAAGACTAGAACCTCAAAAAGGGGACGAGAAGGCAAAGTTAAATATTTGATACTGGTGTGTTCTGAGAGAACTAAAACTGCTATTGATGCATCAAAGAAACAGTATTGTACTGCTAGGATAAATTTGACTTTACGTAAAGATGGAACCTATCGAGTTAGTGCAGTTACTCTCGGTCACAATCATGAATTGGGTACTCCTAGTGTATTCCCAATTAATATTGAGATGAAATGTAAAAGGAAAATGGATCCAGAAGTTATTGACATGGGTGTTAACAAGATATCAGAGCAAGATCAGAAAGAAAGACATGGGATTGGAGAAAATGGAGATGGTGATGCCCTTCAGAAGTATCTGGTGAGGATGCAAGAACAAGATAGAAACTTCTTCTATGCAATTGACTTGGATGATTTGTTCAGCGTGAAGAATGTTTTCTGGTCTGATGGAAGGAGTAGAGCTGCATATGAATCGTTTGGTGATGTGGTGACAGTTGATACTTCATGCTTTTCTAATCACTACAAAGTGCCACTTGTAACTTTTGTTGGAGTTAACCATCATGGGCAATCTGTACTATTTGGTTGTGGGTTGTTATCATCTGAAGACTCACAGTCATTTATTTGGTTGTTTGAATCATTGTTGCATTGCATGTCTGGTGTACCCCCACAAGGAATCGTAACAGATCATTGCTGCAGGACTATGCAGAAAGCAGTTGAAACTGTATACCCCTCCATTCCACACCGGTGGTGTTTGTCAAATATAATGGGAAAACTTCCCGAAGTAATCCAAGAGTACGCTAATTGCAAGACCTTAAGAGATCGTGTGCAGAATGTTGTGTATGACACACCAACAACAGATGAATTTGAGGAGAAATGGAAGAAGATTGTGGAGGATTTTGACCTCAAAGAAAATAAATGGTTGAAGGAATTGTCCCTTGAGCGACATCGCTGGGCTCCTTCCTTTGTAAGAGGTGGATTTTGGGCTGGAATGTATATTAATCCACAAAGTGGAAGTAGGCTTACATGTTTTGACGGATATATAAACCGACAAACAACTCTGAAGCAATTTGTTGATCAGTACAATAATGCCTTGCAATATAAGGCTGAGAAGGAGTATATAGCTGACATACATTCATCCAGTAACAGCCAGACTTGTGTTACCAGTTCTTCAATCGAGAGGCAGTTTCAATCTGCTTATACTCACGCCAAGTTTGTGGAGGTTCAACGTGAATTTGTTGGAAAGGCTGATTGTAACGTTTTTGTTGCTTTTGAAGATGGTTCTATTTGTCACTACAATGTGATAGAGGATATGATAACAGAGGATAAACCTAAGGAATCCTTGGTTGAAGTCATATATAACAGGGAAGATTGTGATCTAAAATGCAGTTGTCATTTCTTTGAGTTCAGAGGTTTACTTTGTAGGCACTCACTTGCAGTACTGTCACAAGAGAGAGTAAAGGAGGTCCCCTGTAAATATATATTGGACAGATGGAGGAAAAATGTTCAGAGGAAGCATGTTTATGTCAAAACCAGCTATGGTGTTGAGCATTTTGGACCTCAAGTGCAGAGGTTTGATCTGTTATGCAATCAATTCAATAGTATTGCTGCTGCTGCAGCTGAATTTGAGGGTACAAGTTCTTTTGTAAAGGATACCCTGTGTAACTTGAAGGAGAAACTTGAACCATGGACATCGTTACTGAGAAACTCTTCTCATGTGGATGTACAGAAACACAGCAATATGATAAATTGA 1962 0.395 MGERSHSDAQLDTISSGTEEHLISRLPKECKIGAITLDESDDVYPVPRPGMIFRSEPEARLYYTRYANQMGFNVKTRTSKRGREGKVKYLILVCSERTKTAIDASKKQYCTARINLTLRKDGTYRVSAVTLGHNHELGTPSVFPINIEMKCKRKMDPEVIDMGVNKISEQDQKERHGIGENGDGDALQKYLVRMQEQDRNFFYAIDLDDLFSVKNVFWSDGRSRAAYESFGDVVTVDTSCFSNHYKVPLVTFVGVNHHGQSVLFGCGLLSSEDSQSFIWLFESLLHCMSGVPPQGIVTDHCCRTMQKAVETVYPSIPHRWCLSNIMGKLPEVIQEYANCKTLRDRVQNVVYDTPTTDEFEEKWKKIVEDFDLKENKWLKELSLERHRWAPSFVRGGFWAGMYINPQSGSRLTCFDGYINRQTTLKQFVDQYNNALQYKAEKEYIADIHSSSNSQTCVTSSSIERQFQSAYTHAKFVEVQREFVGKADCNVFVAFEDGSICHYNVIEDMITEDKPKESLVEVIYNREDCDLKCSCHFFEFRGLLCRHSLAVLSQERVKEVPCKYILDRWRKNVQRKHVYVKTSYGVEHFGPQVQRFDLLCNQFNSIAAAAAEFEGTSSFVKDTLCNLKEKLEPWTSLLRNSSHVDVQKHSNMIN* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1370 653 PANTHER OS03G0843700 PROTEIN 36 647 - -
Pvu1g1370 653 Pfam MULE transposase domain 233 326 IPR018289 -
Pvu1g1370 653 SMART 26again6 530 557 IPR006564 GO:0008270
Pvu1g1370 653 Pfam SWIM zinc finger 529 552 IPR007527 GO:0008270
Pvu1g1370 653 Pfam FAR1 DNA-binding domain 62 137 IPR004330 -
Pvu1g1370 653 ProSiteProfiles Zinc finger SWIM-type profile. 517 555 IPR007527 GO:0008270
Pvu1g1370 653 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 36 647 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1370 Pvu-Chr1 37366238 37368890 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pvu1g1370 MULE 3.7e-22 CL0219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1370 1 37366238 37368890 Pvu1g1370 1 37366238 37368890 ECH