Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0378 ATGGGTGCTTCTGGAAAATGGGTGAAGGCGTTGATCGGACTTAACTCCAAGAACGAACTTGGGGGGAAGAAGAAGAAGTGGAGGCTGTGGAAGAGTTCTTCTGCAGGGGAGAACAGATCTCAAGACTTCGACTATGGCAGTGTTGCTTCCGATTCTTTCACCGCTGCAGTGGCCACAGTTGTCAGAGCTCCACCTAAGGATTTCAAACTCCTCAAGAAAGAATGGGCTGCCACAAGAATCCAAACTGCTTTCCGCGCCTTCTTGGCAAGAAGGGCATTGAGGGCGTTGAAGGGAGTGGTGAGGCTTCAAGCTCTTGTGAGGGGTAGACTTGTGAGGAAGCAGGCTGCAGTCACATTGAGGTGCATGCAGGCCTTGGTTCGTGTCCAGGCACGTGTGAGGGCGCGGCGCGTGCGAATGTCCTTGGAGGGCCAAGCAGTGCAAAACATGCTCAATGAACGCCGCACCAAGGCTGAACTCTACAAGGAAGCTGAGCAATGGAGATCAACAGCCTTTTCAAATTCAAGAGCAAACACCTCTCTCAAGAAGCAAGAGATAGACAAGGCTAACTGGGGATGGAGTTGGTTGGAACGTTGGATGGCAGCAAAGCCATGGGAGAGTAGATTGATGGAACAAACTCATCATCATGCTGATGCCACAGAGCAAACTCCTCCACCAAAGAAATGCGTGGACTCCTCAAATTCAAAAAATATTTCAGAACCATGCAATGTCAAAGTCAGAAAGAACAATGTGAGCATAAGGGTTTCAGCTATACCTCCCCATATTGGGCAAGCCACTCGTTCATCCTCAAGTCCTAGTTCAGAGTTTCACTATGATGAGAGCTCTAATTCATCTTCAATATGCACATCCATGACACCAATATCTGGGAGTGTTTCATTGCATTGTGAGAGGACAGAGGATAGTAACAACAGTAGTAGTACTAGGCCAAGTTACATGAACCTGACAGAGTCAACCAAGGCAAAGCAGAAAAGCAGCAGTCATCAAAGCAATAGATCTCAGAGGCAACAGTCCATGGATGAGTTCCAGTTTCTGAAAAGAACAGCGGTTTTCTCAAATGGAGATTCCAAAAGCAGTGGTGCTTCTGACCCTTCAACCAACTTTTGTAGGCCACTTTACCTACCCACCTACATGGATAAGAAGCCACGGTGA 1167 0.4781 MGASGKWVKALIGLNSKNELGGKKKKWRLWKSSSAGENRSQDFDYGSVASDSFTAAVATVVRAPPKDFKLLKKEWAATRIQTAFRAFLARRALRALKGVVRLQALVRGRLVRKQAAVTLRCMQALVRVQARVRARRVRMSLEGQAVQNMLNERRTKAELYKEAEQWRSTAFSNSRANTSLKKQEIDKANWGWSWLERWMAAKPWESRLMEQTHHHADATEQTPPPKKCVDSSNSKNISEPCNVKVRKNNVSIRVSAIPPHIGQATRSSSSPSSEFHYDESSNSSSICTSMTPISGSVSLHCERTEDSNNSSSTRPSYMNLTESTKAKQKSSSHQSNRSQRQQSMDEFQFLKRTAVFSNGDSKSSGASDPSTNFCRPLYLPTYMDKKPR* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0378 388 MobiDBLite consensus disorder prediction 261 289 - -
Pvu1g0378 388 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 154 - -
Pvu1g0378 388 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 172 386 - -
Pvu1g0378 388 MobiDBLite consensus disorder prediction 322 388 - -
Pvu1g0378 388 ProSiteProfiles IQ motif profile. 97 124 IPR000048 GO:0005515
Pvu1g0378 388 SMART iq_5 72 94 IPR000048 GO:0005515
Pvu1g0378 388 SMART iq_5 95 116 IPR000048 GO:0005515
Pvu1g0378 388 MobiDBLite consensus disorder prediction 211 242 - -
Pvu1g0378 388 Pfam IQ calmodulin-binding motif 75 94 IPR000048 GO:0005515
Pvu1g0378 388 Pfam IQ calmodulin-binding motif 97 114 IPR000048 GO:0005515
Pvu1g0378 388 PANTHER IQ-DOMAIN 5-RELATED 172 386 - -
Pvu1g0378 388 PANTHER IQ-DOMAIN 5-RELATED 1 154 - -
Pvu1g0378 388 MobiDBLite consensus disorder prediction 225 242 - -
Pvu1g0378 388 MobiDBLite consensus disorder prediction 254 289 - -
Pvu1g0378 388 ProSiteProfiles IQ motif profile. 73 101 IPR000048 GO:0005515
Pvu1g0378 388 MobiDBLite consensus disorder prediction 322 371 - -
Pvu1g0378 388 Pfam Protein of unknown function (DUF4005) 279 365 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0378 Pvu-Chr1 3585319 3588513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0378 1 388 IQD Protein Family AT2G26180 52.703 9.50e-108 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0378 - - gmx:100787102 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0378 1 3585319 3588513 Pvu9g0806 9 12770744 12773243 PCT