Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0289 ATGGCATCGCAAGACCCAACACTCCTCAAACTCCACTCTGCACGCTCCGACCTCAACACCCTCCTCCAAGCCTCATCGGAGGCACAGCACAACATCACACAAACCGAGACCCGCTTTTCTCTCCACCAACAATCGCTCTCAACCGCCTCCAGAAGAATCCTCCCTCTGCAGTCCCTTACCATGTCCAGAAAAGCCCTCGACGCCAGAATCACCAGAGCTGTTTCCCCGGCGGTGGAACTCCTCAACACGTTCAAGCGCACGGAGGGTCTTCAGGCCAAGCTGGTGACCTTCTCGGCCGAGCTGTCGTCGGAGAAGTCGCAGCAGAGGAGGTTGGAGAAGCTGGTGGAGTACGTGGGGTGCGTGGAGGAAGTGAAGGAGGGGATAGAGAAGATATGCGAGGAGGTGGAGATGGTGGTTCAGAGGCTGCAGGAGGTGGTGGAGTTTGTGAGCAGGACGAAGGCTGCGGATCAGGGCAGGGACGTGAGACTGAAGGATGCGTTGGTGACGCTGAAGGTGTTGTATGAGAGAGAGGTGGATGAGATGAGGTTCGAGGGGTTGTTGGATCAGGCGTTGCTGCACGTGCAAGATGAGTTTGAGGAGCTGTTGCTGAGGATGAAGCACCGGAATCTGCGGGATTTGGTGAACCACAATGGTGGTGAAGAAAGGGAACTGGGGTCGGAGATGGAGGTCCAAGCCCTCACAAGAATTTCAACCACCCTTGCTGCCAATGATTGCATGGACATTTGCATTGATATATACCTCAAGGCGAGATACAGAAGAGCTGCGAAGGCACTGATGAAGCTAAACCCTGATTACCTTCGAACATACACCCCAGAAGGAATCGACGAAATGGAGTGGGAAACCTTAGAAACAGCCATAACCCTTTGGATTCAACATTTCGAAGTGGCAGTGAAGAAGGTTTTACTTTCAGAAAAGAAACTCTGCGAAAAAGTCCTGGGCGATTTCATGGAGGGTCTAGTTTGGCCAGAATGCTTCATAAAAATATCCGACAAGATCATGGCCGTGTTCTTTCGCTTCGGAGAAGGCGTGGCCAGAAGCAGCAAAGAGCCCCAGAAGCTCTTCAAACTATTGGACATGTTTGAATCCTTGGAAAAACTCAAACCCCAGATATCACAAATCTTCGAAGGAGAATCTGGCGCAGACATATGCACGCGGTTCCGTGAGTTGGAGAAGCTCATCATCGATGCTTCCAGCAAAGTCTTCTGGGAATTCGGACTCCAAATAGAAGGCAACATAGACGGTCTTCCACCTCCGCAAGACGGTTCCGTTCCCAAGCTCGTACGTTACGCCATCAACTACCTCAAATACCTAACAACCGTCAATTACAAAACATCCATGATCAAGATTCTCCGAACACAACAAACATGGAGAGGTAAAGGTGGTAGTTCTGAAACTGGTGGTAATGAGACGTTAACGGACGAGGATTTGTTGAAGCATGCGATTTCCAACGTGATGGAGGCGCTTCAGAGGAACATAGAGTCAAAGAGAGAGTGTTGTAGGGACAAGGTTTTGGTGCATGTGTTCACGATGAACACGTATTGGTACATTTACATGAGGACGAAGAACACGCAGCTGGGTGAGGTGTTGGGGGAGAAGTGCATGAAGGAGGGTTACAAGGCTGTGGCGGAGGAATGTGCTTACTTGTATCAGAAGCAAGCGTGGGGGGGTTTGGTGAAGGTTTTGGATGGTGAGGATTTGAGGGAGGAAGGAAAGGGGAGTGTGGGAAGAGTGGTGAGTGAGAAGGTTGAGACATTCTTCAAGGGTTTGAATGAGGTTTGTGAGAAGCATGGTAGAGGGGTGTATAGTATACCTGATGTGGATTTGAGGGAGCAGATGAGGGAGGCTACACTGAGGGTTGTGGTGCCTGCATATGCAGAATTTTTGGAGAGTTATTCAGAGTTTTTGAACAAGAAAGGGTACCCTAGTGTTGAGAGGGTGAAAGGGTTGGTGGTGAAGGCTTTTGATGGGGGAAGGTTGAGGAGGAAGGGTTCTGCTGCTTCTGGTGATTGGAATGTTGCAAGGAACTCTGGGTCTTTGGAGAGGGAGTAA 2070 0.5029 MASQDPTLLKLHSARSDLNTLLQASSEAQHNITQTETRFSLHQQSLSTASRRILPLQSLTMSRKALDARITRAVSPAVELLNTFKRTEGLQAKLVTFSAELSSEKSQQRRLEKLVEYVGCVEEVKEGIEKICEEVEMVVQRLQEVVEFVSRTKAADQGRDVRLKDALVTLKVLYEREVDEMRFEGLLDQALLHVQDEFEELLLRMKHRNLRDLVNHNGGEERELGSEMEVQALTRISTTLAANDCMDICIDIYLKARYRRAAKALMKLNPDYLRTYTPEGIDEMEWETLETAITLWIQHFEVAVKKVLLSEKKLCEKVLGDFMEGLVWPECFIKISDKIMAVFFRFGEGVARSSKEPQKLFKLLDMFESLEKLKPQISQIFEGESGADICTRFRELEKLIIDASSKVFWEFGLQIEGNIDGLPPPQDGSVPKLVRYAINYLKYLTTVNYKTSMIKILRTQQTWRGKGGSSETGGNETLTDEDLLKHAISNVMEALQRNIESKRECCRDKVLVHVFTMNTYWYIYMRTKNTQLGEVLGEKCMKEGYKAVAEECAYLYQKQAWGGLVKVLDGEDLREEGKGSVGRVVSEKVETFFKGLNEVCEKHGRGVYSIPDVDLREQMREATLRVVVPAYAEFLESYSEFLNKKGYPSVERVKGLVVKAFDGGRLRRKGSAASGDWNVARNSGSLERE* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0289 689 Pfam Exo70 exocyst complex subunit 296 644 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pvu1g0289 689 PANTHER EXOCYST COMPLEX PROTEIN EXO70 5 663 IPR004140 GO:0000145|GO:0006887
Pvu1g0289 689 PANTHER OS08G0519900 PROTEIN 5 663 - -
Pvu1g0289 689 Gene3D Exocyst complex component Exo70 162 668 - -
Pvu1g0289 689 SUPERFAMILY Cullin repeat-like 162 645 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0289 Pvu-Chr1 2624244 2626623 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0289 5 649 EXO70 exocyst subunit family AT4G31540 28.550 4.89e-76 256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0289 1 2624244 2626623 Pvu1g0289 1 2624244 2626623 ECH