Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0282 ATGTTGTGTGCTTGTTCCGGAGAGCAATTCAAATTTGAAGAGGCACCACAGTCACCTGAGTCCTTGGCAACAAGGGATTTCTCTGCAAGTGGTCTTTCTTCAAGGACTGGGGATTGGGAATCCAAATTTGATGAGACGCAAGTCGATGAAGTTGAATCTACTTTAAAAGAAACTCTCTCATTAAACTATGAGGAAGCTCGGGCTTTGCTGGGGAGGCTTGAATTCCAAAGAGGGAACTTTGATGCTGCCCTTCTAGTTTTTGAAGGTATAGACATAAGGGCTTTGGCCCCAAGGATGATCAGGGCTATAGCTGAAAGAACCAAGCAAAGAAAACCACGGTCAAAGGTGGATAATGTGCTTCCTAATGTAATGTCAATGCATTCAGTAAGCCTGCTTCTAGAGGCAATTTTGCTTAAATCCAAATCCTTAGAAGAACTTGGAAGATACACCGAGGCTGCAAAAGAGTGCAGAATTATTGTAGATACAGTTGAATCTGCTCTCCCTAAAGGAATGCCTGAGGGTATTGGTGAAGATTGTAAGTTGCAAGAAATGTTCTACAAAGCATTGGAGTTGCTTCCAAATCTATGGATCAAGGCAGGTTTTCTAGATGAAGCTGTCACTGCTTACCGGCGGGCTCTAATCAAGCCGTGGAATTTGGAGCCGTGGAGATTGGCCAGTGTACAAAAAGATTTGGCTACCACACTACTCTATGGTGGTGTTGAAGTAAACCTACCCTCTCAGTTGCAAGTGAATGGTCTAACTACACCTATGAGTGGCACTGAAGAAGCCATACTTTTGCTGTTAATACTCTCAGGAAAGATGGCACTTCAGGAAATAGACTGGGACCCTGAAATAATGGATCATCTTACATTTTCACTTTCAATAACTGGAATGTTTGAATCATTGGCAGATAACTTAGAGAAGATCCTTCCAGGTCTTTATGATAGGGCAGAGAGGTGGTATTTTCTTGCTCTTTGTTACAGTGCAGCGAGACAGAATGAAGTAGCCTTGAACCTTTTGAGGAAAGCTTGTGGCAGTTCTGAAGCCAAGCACAGACCCTATTTTCCTTCATTTTTGTTTGGTGCAAAGCTGTGTTCTCTATGTCCAAACCATGCTCATGAAGGCATTAAGTTTTCACAGGAAGTTATTGATCTAGCCAAGCATCAAAATGAGCATTTTCTGGGTGAGGGCCAAAAATTTCTGGGCACTTGCCAAGGGGCTGCTGCTAGAATATCTGTACTAGATTCTGAAAGAATTATATTTCAAAGACAGTCTTTGTCCTTTCTAAACGATGCTGTTGCTCTAAATGGAAATAATGATCCAGAAGTGATATTCAGCCTTGGATTGGAAACTGCAATCCAAAGAAATCTAAATGCAGCATATGACAATCTAATGATATACTCTGACATGATGGCTGGCAGCTCAAAAAGAGGTTGGCAGTTGTTAGCACTCATAGTATCAGCACAGCAGCGGTTTAAGGATGCGGAAACTATAGTTGATTTTGCTTTAGATGAGGCTTGTAGTATAGACCAGTTAGAACTACTGAGACTGAAAGCTATACTTCAAATTACTCAGCAGCAACCCAAGCAAGCAATAGAGACCTACAGAATCTTGCTAGCAGTAATTGAATCACAAAAGGACCATTGGCTTCAGGCTAAGGCATTCAGGCATGAGGCATTAACACAACAGAAGTTGGAAATGGAAGCCTGGCAAGATTTGGCTACCATTTATGTAGATCTTTGCTCCTTTCTAGATGCAAAAGTTTGTGTTGACAAGGCCCAGTTGATAGATTTTTTTTCTCCTAGAAGTTGGCATATTACTGGGTTGTTGTTTGAATCTCGAACAATGCATAAGGAGGCCTTAGCTTCCTTCTCAGTCTCATTGTCAATAGAACCGGATTACATTCCCAGTATCATTTCAGCTGCAAAATTGTTGCTTAAACTTGGCATGCAACCACTCCCAATCGCAAGAAGCTTTTTAATGAATGCTTTGAGATTAGATCCTACAAACCATGATGCATGGTTTAACCTTGGTCTAGTTTCAAAAATGGAAGGTTCATTACAACAAGCAGCAGATTGCTTTCAAGCCGCATATGAGCTCAAGCTTTCAGCTCCAGTGCAAAAATTTGAGTGA 2133 0.4144 MLCACSGEQFKFEEAPQSPESLATRDFSASGLSSRTGDWESKFDETQVDEVESTLKETLSLNYEEARALLGRLEFQRGNFDAALLVFEGIDIRALAPRMIRAIAERTKQRKPRSKVDNVLPNVMSMHSVSLLLEAILLKSKSLEELGRYTEAAKECRIIVDTVESALPKGMPEGIGEDCKLQEMFYKALELLPNLWIKAGFLDEAVTAYRRALIKPWNLEPWRLASVQKDLATTLLYGGVEVNLPSQLQVNGLTTPMSGTEEAILLLLILSGKMALQEIDWDPEIMDHLTFSLSITGMFESLADNLEKILPGLYDRAERWYFLALCYSAARQNEVALNLLRKACGSSEAKHRPYFPSFLFGAKLCSLCPNHAHEGIKFSQEVIDLAKHQNEHFLGEGQKFLGTCQGAAARISVLDSERIIFQRQSLSFLNDAVALNGNNDPEVIFSLGLETAIQRNLNAAYDNLMIYSDMMAGSSKRGWQLLALIVSAQQRFKDAETIVDFALDEACSIDQLELLRLKAILQITQQQPKQAIETYRILLAVIESQKDHWLQAKAFRHEALTQQKLEMEAWQDLATIYVDLCSFLDAKVCVDKAQLIDFFSPRSWHITGLLFESRTMHKEALASFSVSLSIEPDYIPSIISAAKLLLKLGMQPLPIARSFLMNALRLDPTNHDAWFNLGLVSKMEGSLQQAADCFQAAYELKLSAPVQKFE* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0282 710 MobiDBLite consensus disorder prediction 15 38 - -
Pvu1g0282 710 Gene3D Tetratricopeptide repeat domain 649 706 IPR011990 GO:0005515
Pvu1g0282 710 PANTHER PROTEIN NPG1 1 709 IPR043376 -
Pvu1g0282 710 SMART tpr_5 567 600 IPR019734 GO:0005515
Pvu1g0282 710 SMART tpr_5 512 545 IPR019734 GO:0005515
Pvu1g0282 710 SMART tpr_5 601 634 IPR019734 GO:0005515
Pvu1g0282 710 SMART tpr_5 671 704 IPR019734 GO:0005515
Pvu1g0282 710 SMART tpr_5 317 350 IPR019734 GO:0005515
Pvu1g0282 710 Gene3D Tetratricopeptide repeat domain 28 240 IPR011990 GO:0005515
Pvu1g0282 710 Gene3D Tetratricopeptide repeat domain 260 541 IPR011990 GO:0005515
Pvu1g0282 710 Gene3D Tetratricopeptide repeat domain 542 648 IPR011990 GO:0005515
Pvu1g0282 710 SUPERFAMILY TPR-like 65 461 IPR011990 GO:0005515
Pvu1g0282 710 PANTHER PROTEIN NPGR1 1 709 - -
Pvu1g0282 710 MobiDBLite consensus disorder prediction 21 37 - -
Pvu1g0282 710 ProSiteProfiles TPR repeat profile. 671 704 IPR019734 GO:0005515
Pvu1g0282 710 SUPERFAMILY TPR-like 424 596 IPR011990 GO:0005515
Pvu1g0282 710 SUPERFAMILY TPR-like 540 695 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0282 Pvu-Chr1 2583597 2588082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0282 1 709 Calmodulin-binding Proteins AT1G27460 57.924 0.0 827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0282 1 2583597 2588082 Pvu1g0282 1 2583597 2588082 ECH
Pvu1g0282 1 2583597 2588082 Pvu9g0738 9 12001858 12006041 PCT