Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0276 ATGAAGAAGAACACACAAATCATCATGAACAATTTCCCTGCCACTCCAAGGTCATCATCATCATCAGCACCTCCAATGGATCCCAAAATTTGGAGCAAATTGCCACCTGAAATCCTTGAATACATCCTCTCTTTTCTTCCTCTCAAAACCTTCTTGAATCTCAGATCCACTTGCAAAGGTTTTTGGTCTCTCATATTCTCTCCCTCCTTCATTTCCAAACACTCTTCTCCCTCTTCCTCCTCTTCCTCTTCTTCTTCTTCTTCTTCTTCACCCTTCTCTTCCTTTCTCCTACTCTCACACCCTCAATTCCACCGCCACTTCCCTCTCTACGATTGCACCCTCGGCACGTGGCGCAACATCTCTCTCTCGCTCTCTGATTCTTCACTACACTCTTGCCCTTCCCTCACCACTCTTGTCTCCTCCGGTGGCCTCTTCTGCCTATCTGATTCACTCTCACGCTCCTTGCTAGTCTGCAACCTTCTGGCCAAGTCTTCTAGAACCATTCAGTACCCAACTTTCTCTCTTCACTTGGAGCATCTCACTTTCGTCACAACCCCAACAGGGTACACCATATTCGTCCTCTGCTCTCACTCTGCTTCAAACTCTGCCTTTGTTTATGACTCAAAGGTTCGAACTTGGAATCGGTTTCACGGTTTTGGTCCGGTTCTCGGTGACAACCATCATCAACAAGGCGTTTTTTTCAAAGGGGGTTTGTATTTTGCAACCCCGGAACCGTTTTCTGTGGTGATGTTTGATTTGGGGAGTGGAAAGTGGGAGAAACCCGTTGGAGGGCTACCGGGTCAGCTCACTTTTCTTCGATTGGTGAGTGATGGAGAAGGGAAATTGTACATGGTTGGTGGGGTTGGGAACAATGGAATCTCGAGGAGCATAAAGTTGTGGGAATTGGGTGGAGATGGGAAGTGGGTGGAAGTGCAAAGTTTGCCTGATCTCATGTGTAAGAAGTTTGTGTGTGTGTCTTACCATAACTATGAGCATGTTTATTGCTTTTGGCATGAAGGGATGATCTGCATTTGCTGCTACACTTGGCCAGAGATTTTGTATTACTTAGTTTCTAGGAGGACTTGGCATTGGCTTCCAAGGTGCCCTTCTTTGCCTCTCAAATGCAGTTGTGGTTTCAAGTGGTTTTCTTTTCTTCCAAATCTCTATGCTTCAGTCTGA 1179 0.4623 MKKNTQIIMNNFPATPRSSSSSAPPMDPKIWSKLPPEILEYILSFLPLKTFLNLRSTCKGFWSLIFSPSFISKHSSPSSSSSSSSSSSSSPFSSFLLLSHPQFHRHFPLYDCTLGTWRNISLSLSDSSLHSCPSLTTLVSSGGLFCLSDSLSRSLLVCNLLAKSSRTIQYPTFSLHLEHLTFVTTPTGYTIFVLCSHSASNSAFVYDSKVRTWNRFHGFGPVLGDNHHQQGVFFKGGLYFATPEPFSVVMFDLGSGKWEKPVGGLPGQLTFLRLVSDGEGKLYMVGGVGNNGISRSIKLWELGGDGKWVEVQSLPDLMCKKFVCVSYHNYEHVYCFWHEGMICICCYTWPEILYYLVSRRTWHWLPRCPSLPLKCSCGFKWFSFLPNLYASV* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0276 392 SUPERFAMILY Kelch motif 103 375 IPR015915 GO:0005515
Pvu1g0276 392 Gene3D - 184 379 IPR015915 GO:0005515
Pvu1g0276 392 ProSiteProfiles F-box domain profile. 28 74 IPR001810 GO:0005515
Pvu1g0276 392 PANTHER F-BOX/KELCH-REPEAT PLANT PROTEIN 30 390 - -
Pvu1g0276 392 MobiDBLite consensus disorder prediction 1 26 - -
Pvu1g0276 392 PANTHER F-BOX/KELCH-REPEAT PROTEIN 30 390 - -
Pvu1g0276 392 Gene3D - 30 73 - -
Pvu1g0276 392 SUPERFAMILY F-box domain 19 72 IPR036047 GO:0005515
Pvu1g0276 392 SMART fbox_2 34 74 IPR001810 GO:0005515
Pvu1g0276 392 Pfam F-box domain 31 61 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0276 Pvu-Chr1 2508242 2509644 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0276 1 2508242 2509644 Pvu9g0731 9 11886296 11887649 PCT