Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0274 ATGAAATGCGTGGAGAACACACGGGACTCGTGCAACTGCGTCGTGAGTCAAGTCCTGCCGTCACTCGCCATGGCCTCGGTGGAGCAGCCTCCAAAGAAGCGAAAGCTTTACGAGCCTTTACTAGAACCGCCACCGTCTTCGCCTCCGTCACCACCACCGCCGGCAACCGAACCAACCCCTCCCTCTCCGCAAACCCTACCCCCGCCGTCTCAGGAGGAGATTCTCGCGAAGCGGCGGAACAAGGACGAAATTCGAAGCGTCTTCGAAGGTTACAAGCGGATTCAACGTTGCTTGCTTAACAAAGACGCTCCTTCCTCTATGGCAGACCTTGAAAAGAGTTATCTCGCGCTCATAACTTCTTCCAGAGGTTGTATGAGTGTTCAAAGAATTGTGGCCAATCTTATTCCTCGGTATGCATGTCACTGTCCAACAGCCTTGGAAGCAGCAGCTAAAGTTGTTATTAATATGCACAACTTTAGTTTGGCATTGATTAGTAGAGGAGAGGATTCCAGTGGTATTGCATTTGAAACTGCTAGAGCTTGTATTTGTGGCCTTGCTGATGTGTGCTGTGTTGGTTCATCGGTGGCACCAACGTCTGCTGTAATTAAAGGAATTTGCTCAGCAGTTTTTCAGAATGTGCTCACCTCTTTTATAGCCTTATTTGAAGGAAAGGATATCTTACAGATGGTCGACAAGAGTTTCCTGAATATGCAAGATAACCCTGAGGTCTTTTCTGAGTTGAAACAGAAAGTTTTAGAGGAGGATGAATCTCCATTGACTAAACTGTCCAAGTTTCGAGTATTATGTCTACTTTGGATTTTTTTCTCGTGTCCAAAAGATTTGCTTGCAGCTTGTTTGGATCTCTTAGGTTCTGCCACAAAAGAGGGAACTAACAATGAAGGACAGCATTTTTTGAGCCTGGTGACTAGCTTGTTTGATGATGATAAAACAGTTCACCTTTTAGATAACACAATTAGTGGACCTAAGTCTTGTACGGATTCTACTGGGTCTGGAATCAGAGATGATGAGGCTGGTGAGGAAGTTGTGACTGAAGGCAACTATGTTTCTGGTGGTGATTCATCTGTTGGCAAGAGCTGCTTACTTATACGGGTTCTTGACAGGAATCCCCCACTCCGGAAATGGATGTTGTGTAGATGTAAGAAGTTACTTGACTTGCTCCCAAATGCATCACTGGAAATTATGTCAGTACTGCAAGGAATTCTTGGAATGTTTCCTCAACAAACAGATTTGGAAGACTGTCAAGCAGATAGTGATGAAGATAAATCCGAATCTTCAATTTACATGAATAGTAGGAAGTACATGGTGCCTAGAAGCTCCGAGGAACATGAAAGCATTGCTGAATCATCTGGAAAAGGAGGCAATTTGAGAGTTTATGTTGGTTCTACTGATGGTTTTACTGATAAGGTTTCTGATAAATATGTGATGGCTCATAGCTCTGCAGTTTCTCTTGACAATAGTCCAGCGTTAAAAGTGGGTTTGCATTATGATAATGGAGTCTCAAAGCCCATTAGCATTGGGGTCGGGGAAGAAGGAAATATGCCAAATGTTAAATGTTCCACACCTAGGGACTCAGTAAGCCATCAAATATTCTCACCTGCAGTTAGAACACCGGGGAATTTTAGGAGTAATTCATTTGATGGTAGAAATGATTTCCTGAATGTAGAGAAAAATCAAGTCTCAAGCATGAATTTCAGTTCACCTCCATTGAGATCGTCTAGTGGATCTGTTAGTAATTCTTTGGCATCTCCTAATCATCATTTTATGTCACCAACTGCTTCAACAAAAAGTCAAATTGTGTGGTGCTGTGATGGGGATCCTGCTGCCATGGATATTGTCTCTGCTTCTAGGCTGCTATGGATAGGTTATGTGGGCCCTGATGTGCCCGAAAGTCATATTAGGTTTCACCTAGAAAGATTTGGTCCTATTGAAAAATTTATTTTCTTCCCAGTTAAAGGCTTTGCCTTGGTCGAATACAGAAGGATCATTGATGCAATAAAAACTCGACACTGTTTACCTGGATGTTTTCCTTGCCGTGTAAAATTCATGGATGTAGGACTTGGAACTAGGGGTGCAATGAGTGGTGTTGCAGTTGGCTCTAGTTCTCATATTTTTGTTGGAAATATTCCTAGTCAATGGGCCAAGGATGAGGTCATGCATGAAACAAGAAAAATGATCCACAAGGGTCCTCTTGCATTCATTGATCTTAGCTGTGAGTTTGCATTACTAATGGAATTTGAAACGCCTGAAGAAGCTACAGCTGTCATGTTGCATCTGAGACAAATGCGAAGAGAAAGAAGTAACTACAACCAGCATTTTGGTCCAGCTCCAGGAACAGGTAATGTTGGAATTGGGCATGCTTATATGGATGGTGCAAGACCTGTACCTGCCCCACCCCCTCCCCCTCCCCATCTTGATCTTCAAGTTAACAACTCTGCTGGATCACCACATGCTCGAACTCTACCAGGGAGCCCCGCTGATAGCAGTCGAACGGTGATGTCTCACCTGTCCACCTTACTTTCTTCATTGTGCTCAAAGTACAATATTAATCAAAACCTAGGTCTCAATGATAATTACATGACTGGCAATAATTTTCCTTCCATGCGTGAGGAAGATATGGTGCCATCCAGCACTCTGTGCATAACTATTCCACATTGTAGCAGTTCTATGTTCCTTTCGGATGATGAGTTAATGGCCATTTGCAATCTTGCCATTGGGAATGCTGGATCCATTGTCCAGTTGACACAAGCAAGCACGCAGATGGGATGTAGTTGGTTTGTCGAATGCAGTAATATTGAAGGAGCAGTTTCTGCGCTAAAGAATCTCCGTTGTTGTCCAGGATTGTTCTTCCAGATAGAATTCAGCAAACCTGGACATCAGAACACTGTACCATTTTCAGTTAAACCAGAGATGAATTGTATGGAGCTTGTATCCCCCAGAATAATTTCTGAAAATCATACTAGTGGAATGCAGAGTGCACCTCTGCCTCATTCAAACTGGCACTTTCCTGGTTCTAGGGAGATGTCAGAGGTTGGAGCAAGGAAACCTGATGGTTATGATAATTTGTCACAGGATCCTCATCAAGGAGGTAATGTTCCACATTCACACTCTGGAGCGCATGCACCTTCCATCCCACCACTGCAGCAAATTCAGTCATCTACTTTTGTTCGCCCTGTTTATGCTCCTCCAAATGGTCCATGGGATCATCGGGGAATAAATAATCATTTACATGTCAGCCAATTGAACACAGGAGTAATGCCAAATAATTTTCATGGTAATGCTGTTGTAAGTCCATTTATTCCTGCTTCAGTGACTCCACTTGCTCAGATACAAGGAACTCCAATGCATCCTTATAACCAGCAGGTGCCTCCATCAATTGTACCACCGCCTTTATCATCCTTGCCACCGCCTCAGCCTGAAATGCCACCTCCACTACCTCCTTCTCCACCACCTTTACCCCAGGTTCAGCCTCCTTTGGTTCCTCCACTGCCTAGTTCTCCTCCTCCCCCTCCTCCTCCGCCAGTGCCTGTCCAAGAACCAGTCAATATGGAATGTTCAGAGCAGTCTTTGCAGTATCAATGGCAGGGGAATCTATGTAAAAGTGGGGTCAATTACTGCAAAATTAATGCATGCAAGGCAGATTCAAATATTTGCCGATATTCAAATGCCATACCTGAGCCTGCTGAGTGGACCACAAAATTAGACATGACAAAACGCACAGATCTTCGACATGTAAAATCAACATTTGCTGCTACTCCATCTCATAGAAGGGAAGTGTGCCGTCTGATCCCATCTTCCACTAGTGATCTCAGAAGGTTTCAGGATTTCGTATCATACTTAAAGCAGAGGGACTGTGCTGGGGTTATTAAAATCCCAGCTTCAAAATCCATATGGGCAAGGCTGCTTTTCATTCTCCCCCACTCACTTGAAACCTGCTCTCTGCTTTCTATTGCCCCTGATCCCTCAGATTGCCTCATTGCTTTGGTTCTTCCCAAAGAAACAAACTTTGAGTGGATATGA 4038 0.4388 MKCVENTRDSCNCVVSQVLPSLAMASVEQPPKKRKLYEPLLEPPPSSPPSPPPPATEPTPPSPQTLPPPSQEEILAKRRNKDEIRSVFEGYKRIQRCLLNKDAPSSMADLEKSYLALITSSRGCMSVQRIVANLIPRYACHCPTALEAAAKVVINMHNFSLALISRGEDSSGIAFETARACICGLADVCCVGSSVAPTSAVIKGICSAVFQNVLTSFIALFEGKDILQMVDKSFLNMQDNPEVFSELKQKVLEEDESPLTKLSKFRVLCLLWIFFSCPKDLLAACLDLLGSATKEGTNNEGQHFLSLVTSLFDDDKTVHLLDNTISGPKSCTDSTGSGIRDDEAGEEVVTEGNYVSGGDSSVGKSCLLIRVLDRNPPLRKWMLCRCKKLLDLLPNASLEIMSVLQGILGMFPQQTDLEDCQADSDEDKSESSIYMNSRKYMVPRSSEEHESIAESSGKGGNLRVYVGSTDGFTDKVSDKYVMAHSSAVSLDNSPALKVGLHYDNGVSKPISIGVGEEGNMPNVKCSTPRDSVSHQIFSPAVRTPGNFRSNSFDGRNDFLNVEKNQVSSMNFSSPPLRSSSGSVSNSLASPNHHFMSPTASTKSQIVWCCDGDPAAMDIVSASRLLWIGYVGPDVPESHIRFHLERFGPIEKFIFFPVKGFALVEYRRIIDAIKTRHCLPGCFPCRVKFMDVGLGTRGAMSGVAVGSSSHIFVGNIPSQWAKDEVMHETRKMIHKGPLAFIDLSCEFALLMEFETPEEATAVMLHLRQMRRERSNYNQHFGPAPGTGNVGIGHAYMDGARPVPAPPPPPPHLDLQVNNSAGSPHARTLPGSPADSSRTVMSHLSTLLSSLCSKYNINQNLGLNDNYMTGNNFPSMREEDMVPSSTLCITIPHCSSSMFLSDDELMAICNLAIGNAGSIVQLTQASTQMGCSWFVECSNIEGAVSALKNLRCCPGLFFQIEFSKPGHQNTVPFSVKPEMNCMELVSPRIISENHTSGMQSAPLPHSNWHFPGSREMSEVGARKPDGYDNLSQDPHQGGNVPHSHSGAHAPSIPPLQQIQSSTFVRPVYAPPNGPWDHRGINNHLHVSQLNTGVMPNNFHGNAVVSPFIPASVTPLAQIQGTPMHPYNQQVPPSIVPPPLSSLPPPQPEMPPPLPPSPPPLPQVQPPLVPPLPSSPPPPPPPPVPVQEPVNMECSEQSLQYQWQGNLCKSGVNYCKINACKADSNICRYSNAIPEPAEWTTKLDMTKRTDLRHVKSTFAATPSHRREVCRLIPSSTSDLRRFQDFVSYLKQRDCAGVIKIPASKSIWARLLFILPHSLETCSLLSIAPDPSDCLIALVLPKETNFEWI* 1346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0274 1345 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 24 1344 - -
Pvu1g0274 1345 PANTHER NUCLEIC ACID BINDING PROTEIN 24 1344 - -
Pvu1g0274 1345 MobiDBLite consensus disorder prediction 1127 1183 - -
Pvu1g0274 1345 Pfam SPOC domain 1193 1336 IPR012921 -
Pvu1g0274 1345 MobiDBLite consensus disorder prediction 26 70 - -
Pvu1g0274 1345 MobiDBLite consensus disorder prediction 1118 1183 - -
Pvu1g0274 1345 MobiDBLite consensus disorder prediction 814 836 - -
Pvu1g0274 1345 MobiDBLite consensus disorder prediction 798 836 - -
Pvu1g0274 1345 SUPERFAMILY RNA-binding domain, RBD 612 682 IPR035979 GO:0003676
Pvu1g0274 1345 MobiDBLite consensus disorder prediction 1004 1051 - -
Pvu1g0274 1345 MobiDBLite consensus disorder prediction 41 68 - -
Pvu1g0274 1345 Gene3D - 614 693 IPR012677 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0274 1 2486688 2498473 Pvu1g0274 1 2486688 2498473 ECH