Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0268 ATGGACCCGTCTATCATGAAGCTTCTAGAAGATGACGAGGATGAAACAATGCATTCAGGGGTGGATGTGGAGGCCTTCCAGGCTGCTCTAAATAGAGATATAGGAGGAGACTTGTCTGCTTCTCTTCCTGGTTCAGATGCAGTGTTGTCTCAAGGAAGCAATAATACATCAAGTCAATCTTTATCACAGTGGCCTACTTCTAACCCTGACAGCCAAACTGATGGTCAAAATCAAGAGCCTAAAACTGCACAACAAGAGCAACATTCATCTGAGATGGAGCCGAAGCAACATGGGTCGCTTGGCGAGCATCTTCAGCATGTTGCTTCTCAGGATGTAAATAATCCTCATCTATCACAGAAACAATCTCAAGATGACTGTCACCAAGCACAAGCACCTGCTGTACAAGTTCCCCTCCACAATTCTCAAACTATTGGAATTCAGAATTCTGTAAAGGATTCAGTTCTTAATAATGAAGTAGTAAAGAGTCATAATCCCAGCAGTGAATCTCAGTATGCAAAGTTGCAGCAGATGAGTAATCAACAGGCTACAGTCTCTGAGCAGCCAAGTAGCCAAGTAAATCGTAGTAAACAAGTACCATTTGGCCTGTTGCTACCCATCTTGCTTCCTCAACTTGCCAAAGACAGAGCCATGCAACTTCAAACCTTATTTGCTAAATTGAAGAAAGATGAAATACCAAAAGACAGTTTTGTGCGGCTTATGAAAGGTATCGTAGGGGACCAGATGCTTAGATTAGCATTAGCAAAGGTGCAAATGCAACCACAGGCAAGGTCCAATCAAGCATCTGCTGGGCAGCAGCTTCCTGTAAGGATGCCAACTGTTAGTTCAGGTGCAAGGCAATTGAATGATCCCCATGCTTTAGCACAGATGCATCAAAGAAGTATGAATGTTGCCGTTGACCAATCTCGCCTGAGTTCTTCAGCTGGCCAAACTATGGATAGTAATGCTAGAAAATCTCAGGAATTCGATGTTAAAATAGAATCTCAAGGATTGCAACCAAACCAGTTGACGTCTTCCAGTTCCAACACAGTAGGTCAAGAAACAGAAAGAACATCAGTTCACATACAAGGGCTCAATAAGCAGCAGCAACACCATCTACATTTTGCACCAACATATGGAAACAGTGGTGGTAACTATAACCCTTATTCTGGGGCAACAAGTAGTTCCTCTTCGTCTATCAAACTGCAATCACATGATTCACACATGAGTCAAATTCCTCATCAAAGTATTGGTTCAAATCACTTAGGTGGGTCAACACATGGTTTGAGTGTAACTGGTATGCCAAAAGTTGAACAGCAGAATTCTTTCAATGATCCCAAGAGACTGCCAGGTGGATCTGTGTCTTCTTCTATAAACAATACAGCATCTCAACAAACTTCAACTGCTTGGCAATCATCAACAAACAAAGAACAAAATCTGGGCTTAATGTCATCTGTTTCTTATGTCAAGAAGGAACCTACTGACTTATCTACTGAGCAGCAAAATAGGCACAATTTGTCAAAATTGCACGGGTATTCTTCTGTTAATTCTGCTCAGCTTGAACAGAGTGGTGCCAGTCAAGGAACTCTAAAAGATGACTTTTCAAGAGGTCTTCCGGCATCCACAAACATGCCACCTACAACATCTACTGGCTTGCTACCACACAGTTCTGGTTCCTCTTCTATAATGACCCACCTAGACTCTAGTGTCCCGGTTCCATCAAATGCTTCTGGAATTGTTGCTAGGACATCTTTTAAAAAGTCTGCCGTTACCCAAAAGAAACCACTTGAAGCACTTGGTTCCTCACCTCCTCCTTCTAGTAAAAAACAAAAAACATCTGGGGGATATGTTGAACAAAGCATTGAACAACTTAATGATGTCACTGCTGTTAGTGGAGTTGACCTCAGGGAAGAGGAAGAGCAGTTATTTTCAGGGCCCAAAGAGGATAGTCGAGTGTCAGAAGCATCTCGAAAGGCTGTGCAAGAAGAAGAGGAAAGACTGATCTTGCAGAAAGCTCCATTGCAAAAAAAATTAATTGACATCATGGCCAAGTCTGGCTTGAAGGGTATGAGCAATGATGTGGAGAAATGTTTGTCACTGAGTGTGGAGGAAAGGATGCGTGGACTGATAAGTAATCTGATTAGAATATCAAAACAGAGGGTTGATTTTGAGAAAACGAGACATCGGACTGTTGTCACTTCAGATGTTCGGCAGCAAATCATGACAATAAATAGGAAAGTAAGGGAAGAGTGGGAGAAAAAACAGGCAGAAGCAGAGAAGCTTCGGAAACTAAATGATGTTGACGGCAGTACTGGAGTTGATGGTGACAAGGATAAGGACGACCGTGGTAAATCAACAAAGGTGAACAAGGAAGAGGATGACAAGATGAGGACAAATGCTGCCAATGTTGCTGCTCGTGCTGCTTATGGGGGAGATGACATGCTGTCAAAGTGGCAACTTATGGCGGAGCAAGCCAAGCAGAAACGTGAAGGGGTGGACCCGTCATCTGGTTCTCAACCAGCTAAAGATGTGAACCGCAAATCTTCATCAACATCTGAAAGAAGTACAAAGGATAACCAAGAAGGGGAGAAAAGAGGTTCAACCCCTTTTCTAGCAAGTTCAGTGGCCAGAAAACTTGGAAAGAGTCATGCCTTGGCCCCTCACACTAGTGTAGCTCGAAGCATCTCTGTCAAGGATGTGATTGCAGTCCTGGAGAGGGAGCCCCAGATGTCTAAATCCCCACTCATACATCGCTTGTACGAGAAAATTCATTCTGAAGCCCCAGTTGAACAAGGTTAA 2796 0.4317 MDPSIMKLLEDDEDETMHSGVDVEAFQAALNRDIGGDLSASLPGSDAVLSQGSNNTSSQSLSQWPTSNPDSQTDGQNQEPKTAQQEQHSSEMEPKQHGSLGEHLQHVASQDVNNPHLSQKQSQDDCHQAQAPAVQVPLHNSQTIGIQNSVKDSVLNNEVVKSHNPSSESQYAKLQQMSNQQATVSEQPSSQVNRSKQVPFGLLLPILLPQLAKDRAMQLQTLFAKLKKDEIPKDSFVRLMKGIVGDQMLRLALAKVQMQPQARSNQASAGQQLPVRMPTVSSGARQLNDPHALAQMHQRSMNVAVDQSRLSSSAGQTMDSNARKSQEFDVKIESQGLQPNQLTSSSSNTVGQETERTSVHIQGLNKQQQHHLHFAPTYGNSGGNYNPYSGATSSSSSSIKLQSHDSHMSQIPHQSIGSNHLGGSTHGLSVTGMPKVEQQNSFNDPKRLPGGSVSSSINNTASQQTSTAWQSSTNKEQNLGLMSSVSYVKKEPTDLSTEQQNRHNLSKLHGYSSVNSAQLEQSGASQGTLKDDFSRGLPASTNMPPTTSTGLLPHSSGSSSIMTHLDSSVPVPSNASGIVARTSFKKSAVTQKKPLEALGSSPPPSSKKQKTSGGYVEQSIEQLNDVTAVSGVDLREEEEQLFSGPKEDSRVSEASRKAVQEEEERLILQKAPLQKKLIDIMAKSGLKGMSNDVEKCLSLSVEERMRGLISNLIRISKQRVDFEKTRHRTVVTSDVRQQIMTINRKVREEWEKKQAEAEKLRKLNDVDGSTGVDGDKDKDDRGKSTKVNKEEDDKMRTNAANVAARAAYGGDDMLSKWQLMAEQAKQKREGVDPSSGSQPAKDVNRKSSSTSERSTKDNQEGEKRGSTPFLASSVARKLGKSHALAPHTSVARSISVKDVIAVLEREPQMSKSPLIHRLYEKIHSEAPVEQG* 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0268 931 MobiDBLite consensus disorder prediction 331 476 - -
Pvu1g0268 931 MobiDBLite consensus disorder prediction 305 476 - -
Pvu1g0268 931 MobiDBLite consensus disorder prediction 846 863 - -
Pvu1g0268 931 MobiDBLite consensus disorder prediction 830 845 - -
Pvu1g0268 931 MobiDBLite consensus disorder prediction 1 20 - -
Pvu1g0268 931 Gene3D Histone, subunit A 668 713 IPR009072 GO:0046982
Pvu1g0268 931 Pfam Transcription initiation factor TFIID component TAF4 family 623 917 IPR007900 GO:0005669|GO:0006352
Pvu1g0268 931 MobiDBLite consensus disorder prediction 761 798 - -
Pvu1g0268 931 MobiDBLite consensus disorder prediction 44 85 - -
Pvu1g0268 931 MobiDBLite consensus disorder prediction 305 323 - -
Pvu1g0268 931 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 47 923 IPR045144 GO:0005669|GO:0006352
Pvu1g0268 931 ProSiteProfiles RST domain profile. 191 262 IPR022003 -
Pvu1g0268 931 PANTHER IP01149P-RELATED 47 923 - -
Pvu1g0268 931 MobiDBLite consensus disorder prediction 35 101 - -
Pvu1g0268 931 Pfam RCD1-SRO-TAF4 (RST) plant domain 194 257 IPR022003 -
Pvu1g0268 931 Coils Coil 743 763 - -
Pvu1g0268 931 MobiDBLite consensus disorder prediction 539 574 - -
Pvu1g0268 931 MobiDBLite consensus disorder prediction 602 616 - -
Pvu1g0268 931 MobiDBLite consensus disorder prediction 516 574 - -
Pvu1g0268 931 MobiDBLite consensus disorder prediction 593 616 - -
Pvu1g0268 931 MobiDBLite consensus disorder prediction 822 890 - -
Pvu1g0268 931 CDD TAF4 618 917 IPR007900 GO:0005669|GO:0006352
Pvu1g0268 931 MobiDBLite consensus disorder prediction 86 100 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0268 1 2404367 2413536 Pvu1g0268 1 2404367 2413536 ECH