Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0261 ATGGCAACAGCCTCAGAGAACAACACCAACGCCACGCGCCCCCAACGCGAGGCCAAGAAGAGAGCCGCAGCTGCCATATGCCAACTGCACGGGAATGCCAAGAAGAAGCGCGTCGTTTTGGGAGACCTAACCAATGTCACTCACGCAGTTGCCGTTTCAGATATTCAAAAACGGAAAAAAATCAAACTCCAGAAACCGGTGGTGGCGGTTGCAACGCCGGAGAATGTCCACGAGAGAAGCGACCCGCAACTGTGCGGGCCTTATGTTTCTGATATATACGAGTACCTTTGCGGAATGGAGGTTCTTCCTAGTAAGAGACCTTTACCTGATTATATCCAGAAAGTTCAGAAGGACGTGAATGCTAATATGCGCGGGGTTCTGGTGGATTGGTTGGTTGAGGTTGCGGAAGAGTATAAACTGGTGTCTGATACGTTGTATTTTTGTGTGGCGTATATAGATAGATTTTTATCGTTGAATGTATTGTCCAGACAGAGATTGCAGTTGCTTGGGGTTGCTGCAATGCTTATCGCTTCGAAATATGAAGAGATTAAGCCACCTGAGGTGGAGGACTTTTGTTACATTACGGATAATACATACTCTAAGGAAGAGGTTGTGAATATGGAAGCCGATATATTGAAGGCTTTGAAATTTGAATTGGGTGGTCCAACAGTGAAGACATTCTTGAGGAGGTTCTGTCGAGTTGGTCAAGAGGGCATTGATGCTTCTGATCTCCAGTTTGATTTCCTTAGCTGCTATCTTGCCGAGCTCAGTTTGTTGGATTATAATTGTGTAAAGTTTGTGCCTTCTTTGGTGGCAGCTTCTGTTGTATTCTTAACAAGATTTATGTTAAGCACAAAGACACATCCTTGGAATTCGGCACTCCATCAACTCACTAGATATAAACCTGCCGACTTCAAGGAATGTGTTCTAAACATACATGATTTATACCTCAGTAGGAAGGGGCCTTCTTTGCAAGCTGTGAGAGAGAAATACAAACAGCATAAGTTCAAATGTGTGGCAACAACACCATCTCCTCCCGAGATACCCCTTTCTTTTTTTGAATTGTCAGGATCAGATTCTTAG 1083 0.4432 MATASENNTNATRPQREAKKRAAAAICQLHGNAKKKRVVLGDLTNVTHAVAVSDIQKRKKIKLQKPVVAVATPENVHERSDPQLCGPYVSDIYEYLCGMEVLPSKRPLPDYIQKVQKDVNANMRGVLVDWLVEVAEEYKLVSDTLYFCVAYIDRFLSLNVLSRQRLQLLGVAAMLIASKYEEIKPPEVEDFCYITDNTYSKEEVVNMEADILKALKFELGGPTVKTFLRRFCRVGQEGIDASDLQFDFLSCYLAELSLLDYNCVKFVPSLVAASVVFLTRFMLSTKTHPWNSALHQLTRYKPADFKECVLNIHDLYLSRKGPSLQAVREKYKQHKFKCVATTPSPPEIPLSFFELSGSDS* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0261 360 CDD CYCLIN 123 212 IPR013763 -
Pvu1g0261 360 Gene3D - 107 220 - -
Pvu1g0261 360 Pfam Cyclin, C-terminal domain 222 344 IPR004367 -
Pvu1g0261 360 ProSitePatterns Cyclins signature. 124 155 IPR006671 -
Pvu1g0261 360 CDD CYCLIN 222 313 IPR013763 -
Pvu1g0261 360 SUPERFAMILY Cyclin-like 222 347 IPR036915 -
Pvu1g0261 360 SMART cyclin_7 129 213 IPR013763 -
Pvu1g0261 360 SMART cyclin_7 226 314 IPR013763 -
Pvu1g0261 360 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 24 356 - -
Pvu1g0261 360 Pfam Cyclin, N-terminal domain 91 219 IPR006671 -
Pvu1g0261 360 SUPERFAMILY Cyclin-like 80 219 IPR036915 -
Pvu1g0261 360 PANTHER CYCLINS 24 356 IPR039361 -
Pvu1g0261 360 Gene3D - 91 341 - -
Pvu1g0261 360 SMART Cyclin_C_2 222 345 IPR004367 -
Pvu1g0261 360 PIRSF Cyclin_A_B_D_E 1 351 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0261 Pvu-Chr1 2317826 2321825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0261 8 354 Core Cell Cycle Gene Families AT1G47230 59.444 1.11e-150 427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0261 1 2317826 2321825 Pvu1g0261 1 2317826 2321825 ECH
Pvu1g0261 1 2317826 2321825 Pvu9g0709 9 11696228 11698237 PCT