Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0252 ATGGGCCAATCTGCGTCCTCCGCTGCCGCTGTTGCTTGTCGTCGCGAGAGGGACCAAGGCAACCGCTCTGTCAACATCTCCAACACCAGATCCACAGCCTCGGTTTTGCCGATGGTCGGTTATTCATGCAGTACAGGCGAAGGCGACAGCGATAACCGCCGCGTTGAGGTGGTAAGCGATGGAACCACCGACTACATATCCGATCTCCCGAACGAGTGTTTGGCTTCAGTGTTTCAGTTTCTCAGCTCCGCCGATCGGAACCGCTGTTCGCTCGTTTGCCAGCGGTGGCTACAGATCGAAGGACAGAGCCGACACCGTCTCTCGCTTAACGCAGAAGCAGACCTGTTATCGGCGATTTCATCACTCTTCTCTCGGTTCGACTCGGTCACGAAGCTCGCGCTGAAGTGCAACCGTAGATCCGTGAGCATACGCGACGACTCGCTCGTGCTGATCTCGCAGCGGTGCCCTAACCTCACGCGCCTCAAGCTCCGGGCGTGCAGGGAGCTAACCGACGCCGGAATGGAAGCGTTTGCCAAGAACTGCAAGGGATTGAAGAAACTTTCATGTGGATCGTGCACCTTTGGATCCAAAGGAATGAACGCTGTGCTCGACAACTGCGCCTCGCTGGAGGAGCTCTCCGTGAAGCGCCTCCGCGGAATCACTGACGCGGCGGCGGCGGAACCGATCGGACCTGGTGTCGCGGGGGCGTCGCTGAAGACCATTTGCCTGAAGGAGCTCTACAACGGACAGTGTTTCGGAACGCTGATTCTCGGCGCAAAGAATCTAAAGACCTTGAAACTTTTCCGGTGCTCCGGGGATTGGGACCGGCTCTTTCAACTAATGGCTGATCGAATTACTAAAATGGTTGAGGTTCACCTGGAGAGGCTTCAGATTAGCGACATTGGATTGCAAGCAATCTCAAATTACTCGAATTTGGAGATTTTGCATCTTGTTAAGACTCCTGAATGTTCTGATATTGGACTTGTTGCCATTGCAGACAGGTGCAAGCTTTTGCGGAAGCTTCACATTGATGGATGGAAGGCGAATAGAATTGGCGATGAGGGGTTGATAGGTGTTGCTAAAGGTTGCCCTAATTTGCTTGAATTAGTGCTAATTGGGGTTAACCCTACTAAAGCGAGTTTGGAAATGTTGGCATCTAATTGCCAGAATCTTGAGCGGTTGGCTTTGTGTGGAAGTGATTCGGTGGGTGATCCTGAAATTTCTTGTATTGCTGCTAAGTGTGTCGCTTTGAAGAAACTGTGTATTAAGAGTTGTCCTGTTTCGGACCAAGGGATGGAGGCATTGGCGAATGGGTGTCCCAATTTGGTGAAAGTGAAGGTTAAGAAGTGTAAGGGGGTTACCCCTGAGGGCGGGGATTGGTTGAGGAGGACTAGGGGATCAATTGCTGTTAATTTAGATACTGGTGAGGCCGAACTTCAGGAAGCTAGTGCTAGTGCTAGTGATGGAGGGGCACAGGAAAATGGTTTAGAGTTCCCTCAAATGCCTGCCCAAATCGCTGCGGCGGCGGCGGTGGCATCAGCAGCATCGGCCAGCACCGCCCGCTCTAGTTCGTTCAAGTCGAGGTTAGGACTTTTATCTGGGAGGAGCTTAGTGGCTAGCACTTTGAGGAGATGGTCGGGTGGCAGCACTAGTGCACGGCATGGTTAG 1668 0.5276 MGQSASSAAAVACRRERDQGNRSVNISNTRSTASVLPMVGYSCSTGEGDSDNRRVEVVSDGTTDYISDLPNECLASVFQFLSSADRNRCSLVCQRWLQIEGQSRHRLSLNAEADLLSAISSLFSRFDSVTKLALKCNRRSVSIRDDSLVLISQRCPNLTRLKLRACRELTDAGMEAFAKNCKGLKKLSCGSCTFGSKGMNAVLDNCASLEELSVKRLRGITDAAAAEPIGPGVAGASLKTICLKELYNGQCFGTLILGAKNLKTLKLFRCSGDWDRLFQLMADRITKMVEVHLERLQISDIGLQAISNYSNLEILHLVKTPECSDIGLVAIADRCKLLRKLHIDGWKANRIGDEGLIGVAKGCPNLLELVLIGVNPTKASLEMLASNCQNLERLALCGSDSVGDPEISCIAAKCVALKKLCIKSCPVSDQGMEALANGCPNLVKVKVKKCKGVTPEGGDWLRRTRGSIAVNLDTGEAELQEASASASDGGAQENGLEFPQMPAQIAAAAAVASAASASTARSSSFKSRLGLLSGRSLVASTLRRWSGGSTSARHG* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0252 555 SMART LRR_CC_2 285 309 IPR006553 -
Pvu1g0252 555 SMART LRR_CC_2 181 205 IPR006553 -
Pvu1g0252 555 SMART LRR_CC_2 310 334 IPR006553 -
Pvu1g0252 555 SMART LRR_CC_2 335 362 IPR006553 -
Pvu1g0252 555 SMART LRR_CC_2 155 180 IPR006553 -
Pvu1g0252 555 SMART LRR_CC_2 388 413 IPR006553 -
Pvu1g0252 555 SMART LRR_CC_2 414 438 IPR006553 -
Pvu1g0252 555 SMART LRR_CC_2 206 244 IPR006553 -
Pvu1g0252 555 SUPERFAMILY RNI-like 109 471 - -
Pvu1g0252 555 ProSiteProfiles F-box domain profile. 63 99 IPR001810 GO:0005515
Pvu1g0252 555 Pfam F-box domain 66 99 IPR001810 GO:0005515
Pvu1g0252 555 MobiDBLite consensus disorder prediction 1 24 - -
Pvu1g0252 555 Gene3D - 65 101 - -
Pvu1g0252 555 Pfam Leucine Rich repeat 417 436 IPR001611 GO:0005515
Pvu1g0252 555 Pfam Leucine Rich repeat 155 178 IPR001611 GO:0005515
Pvu1g0252 555 Gene3D Ribonuclease Inhibitor 102 228 IPR032675 -
Pvu1g0252 555 SMART fbox_2 69 109 IPR001810 GO:0005515
Pvu1g0252 555 PANTHER F-BOX PROTEIN SKIP2 49 493 - -
Pvu1g0252 555 SUPERFAMILY F-box domain 61 99 IPR036047 GO:0005515
Pvu1g0252 555 Gene3D Ribonuclease Inhibitor 232 492 IPR032675 -
Pvu1g0252 555 PANTHER UNCHARACTERIZED 49 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0252 Pvu-Chr1 2204880 2207282 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0252 1 2204880 2207282 Pvu1g0252 1 2204880 2207282 ECH