Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0249 ATGAGTAGCATTCCTGCAACATTGTTGGTCTCAATTTTGTACCTCCTCTTGGTGTCTGTGCACATGTCACCACGTGATGTTAACATAGACACAAAAAGTCTCAGAAGTAGTAGCAGTGGCCACAGGAGCAAAGGAACCAAAGGTTGCAACCACAACAACAATCTATTGGACACAAACACAACCCCATGTCAAAAATCTACTACCATTCAAGCAGTTCCAGCTTCTCCTACCCTTGTATTTGCAGACCAAAGACTTCAAGTAGTGTATCCAATAATCCAAAAATTCAAATCTACCATCACCTCAGATCCTCTAGGAGTGACCAACACTTGGGTAGGATCAGACATATGCAGCTACAAAGGCTTCTACTGTGACACTCCCCCTGACAACACTTCTGCCACTGCTTTGGCTTCTATTGACTTCAATGGTTTTCAACTTGCTGCTTCCACCCTTGATGGCTTCATTGATAACCTCCCTGATATTGCTCTCTTCCATGCAAATTCCAACAATTTTGGTGGCACCATCTCACCCCAAATAGCCAAACTCCCTTACCTCTATGAGCTTGATGTTAGCAACAACCAATTATCTGGTCCTTTTCCCTCTGCTGTTCTAGGCTTGAGTACTTTAACATTCTTGGACTTAAGGTTCAATTTCTTCTCTGGGCCAGTGCCACCACAAATATTCATACAGAACCTCCAAGTCCTTTTCATAAACAACAACATCTTCACTCAAGGGTTGCCTGATAACTTAGCCACCACTCAAATTCTCTTACTCACCTTAGCAAACAACAAGTTCATGGGTCCAATCCCAAGAAGTCTTCCCAAGGCTTTGGCCACTCTAAGTGAAGTGTTGTTCCTTAACAACCAGTTAACAGGTTGTTTGCCTTATGAGATTGGTTTTCTTGAAGAGGCCACAGTGTTTGATGCTGGGAACAACCAACTGACAGGTCCTTTGCCTTTATCTTTGAGTTGTCTTGAGAAGGTGGAGGTGCTCAATTTGGGTGGTAATCTTTTGTATGGCATGGTGCCAGAAGTGGTGTGTGCAGGGTTGGTGAATTTGGTCAACTTTTCATTATCAGATAACTATTTCACTCATGTGGGGCCACTGTGTAGGATTCTGATTCAGAGAGGGGTTCTTGATGTTAGGAACAATTGTATTCCTGATCTTCCCTTTCAGAGATCAGTGATTGAGTGTGCTGAGTTCTTTGCAACACCAAGGATGTGTCCCTTCATGTGGTTTTATAGCTTCATCCCTTGTAAGCTTCCTTTTCAAAATCACACTCCTTAG 1284 0.4299 MSSIPATLLVSILYLLLVSVHMSPRDVNIDTKSLRSSSSGHRSKGTKGCNHNNNLLDTNTTPCQKSTTIQAVPASPTLVFADQRLQVVYPIIQKFKSTITSDPLGVTNTWVGSDICSYKGFYCDTPPDNTSATALASIDFNGFQLAASTLDGFIDNLPDIALFHANSNNFGGTISPQIAKLPYLYELDVSNNQLSGPFPSAVLGLSTLTFLDLRFNFFSGPVPPQIFIQNLQVLFINNNIFTQGLPDNLATTQILLLTLANNKFMGPIPRSLPKALATLSEVLFLNNQLTGCLPYEIGFLEEATVFDAGNNQLTGPLPLSLSCLEKVEVLNLGGNLLYGMVPEVVCAGLVNLVNFSLSDNYFTHVGPLCRILIQRGVLDVRNNCIPDLPFQRSVIECAEFFATPRMCPFMWFYSFIPCKLPFQNHTP* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0249 427 MobiDBLite consensus disorder prediction 30 53 - -
Pvu1g0249 427 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 22 424 - -
Pvu1g0249 427 Gene3D Ribonuclease Inhibitor 252 390 IPR032675 -
Pvu1g0249 427 Gene3D Ribonuclease Inhibitor 91 251 IPR032675 -
Pvu1g0249 427 PANTHER BNAA09G53810D PROTEIN 22 424 - -
Pvu1g0249 427 SUPERFAMILY L domain-like 97 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0249 Pvu-Chr1 2170834 2172325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0249 70 404 Leucine-rich Repeat extension Gene Families AT3G24480 42.985 1.33e-85 268
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0249 1 2170834 2172325 Pvu1g0249 1 2170834 2172325 ECH