Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0246 ATGAGTGCTTCTGAACGGTTCCTTGCGAATTCGATGGAGACTGTGATGGGCTCTGCCGTCGTCAATTTCGTGAACACGACGTTGAATTGGGTGATGTTCGCGTTGGATGCACCTTCTGCGCGAGCTGTGGTTTTCGGAGTCCATATCGGCGGCCATTTATTCATCGAAGTTTTTCTGCTGGTGGTCATACTTTTCTTGCTTTCGCAGAAAAGTTACAAGCCTCCTAAAAGGCCATTGACAAACAAGGAAATTGACGAATTATGTGATGAATGGGTTCCAGAACCCCTTATTCCTTCTCTTAACAAAGAGTTGCATTATGAACCACCAGTGCTGGAGAGTGCTGCTGGGCCACACACCGTAATCAAAGGCAAAGAAGTTATCAATTTTGCTTCAGCAAACTATCTTGGGTTTATAGGTCATCCAAAGCTACTTGACTCGTGTTCTTCTTCTTTAGCAAAATATGGTGTTGGTTCTTGTGGTCCTCGTGGGTTTTATGGGACAATTGATGTCCACCTTGATTGTGAAGCAAGAATAGCGAAATTTTTAGGAACCCCTGATTCAATTCTCTACTCTTACGGACTTTCAACCATGTTCAGTGCAATTCCTGCTTTCTCTAAAAAAGGAGATATAATTGTAGCGGATGAGGGAGTTCACTGGGGAATACAGAATGGCCTTCATCTTTCTCGAAGCACAGTAGTGTATTTTAAGCACAATGACATGGACTCTTTAAGAGAAACGCTAGAGAACATTACTGTCAAATATAAGCGGACCAAGAATTTGAGGCGATATATTGTTGTTGAAGCTGTCTACCAGAATTCTGGCCAAATAGTACCCTTGGACGAGATCGTTAAATTGAAGGAAAAATATCGATTTCGTGTTTTGCTGGATGAGAGCAACTCATTGGGTGTGCTTGGAAGTTCCGGAAGAGGTCTCACTGAACATTGTGGAGTTCCGGTTGAGAAGATAGACATTGTAACTGCTGCTATGGGACATGCATTGGCCACAGAAGGAGGATTCTGCACTGGAAGTGCAAGAGTTATAGATCACCAACGATTGAGTAGCTCTGGTTACGTCTTTTCTGCTTCTTTGCCTCCTTATCTTGCAAGCGCTGCAATTGCAGCTATTGATATCCTGGAGGAAAATCCCACTCTGATAACAAAGCTGAAGAACAATATTTCTTTGTTAAGGAAAGAATTGTCAAAAATATCGGGCATCACAATTGCAAGTAATCCAGAGTCACCTATTGTTTATTTGAGATTAGAGAAATCAACAGGTTCCGTGAAAGATGACCTGCGTCTGCTTGAAAATATCGCGGAACGGGTTTTGAAAGAAGAATCTGTATTTGTGGTTGTTTCCAAAAGATCAACATTGGATAAATGCCGTTTGCCTGTAGGAATTAGATTGTTTGTTTCTGCAGGGCATTCAGAGTCTGATGTGCTCAAGGCATCCGAATCATTGAAGAGGGTTACAGCATCAGTCCTGGGTGGTTAA 1491 0.4239 MSASERFLANSMETVMGSAVVNFVNTTLNWVMFALDAPSARAVVFGVHIGGHLFIEVFLLVVILFLLSQKSYKPPKRPLTNKEIDELCDEWVPEPLIPSLNKELHYEPPVLESAAGPHTVIKGKEVINFASANYLGFIGHPKLLDSCSSSLAKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLHLSRSTVVYFKHNDMDSLRETLENITVKYKRTKNLRRYIVVEAVYQNSGQIVPLDEIVKLKEKYRFRVLLDESNSLGVLGSSGRGLTEHCGVPVEKIDIVTAAMGHALATEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLASAAIAAIDILEENPTLITKLKNNISLLRKELSKISGITIASNPESPIVYLRLEKSTGSVKDDLRLLENIAERVLKEESVFVVVSKRSTLDKCRLPVGIRLFVSAGHSESDVLKASESLKRVTASVLGG* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0246 496 Coils Coil 240 260 - -
Pvu1g0246 496 SUPERFAMILY PLP-dependent transferases 96 490 IPR015424 -
Pvu1g0246 496 Pfam Aminotransferase class I and II 125 486 IPR004839 GO:0009058|GO:0030170
Pvu1g0246 496 Gene3D Aspartate Aminotransferase, domain 1 119 483 IPR015422 GO:0003824
Pvu1g0246 496 PANTHER LONG CHAIN BASE BIOSYNTHESIS PROTEIN 1-LIKE 18 495 - -
Pvu1g0246 496 Gene3D - 140 381 IPR015421 GO:0003824
Pvu1g0246 496 PANTHER CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE 18 495 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0246 16 350 Acyl Lipid Metabolism Gene Families AT4G36480 77.910 0.0 564