Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0245 ATGGTTCAACTGATACATGTTGCGGTGGTGGCAGCATCCTTGGGATGTGTTTCAACCCTTTTGCTGCTTTTCATGTGGCGTTTGTGTCATCACAAGAAAGAGCACAGAAACTTTGTTGAAGCCAATAGCTTGACCAGAATGGAGAGTCTCCAAGCAGGAATTGCAAGACTTCATCAACAACAACACCCTGCAGTCTATCACCAATTTGACCACAAAAACAAAAACAAAGGCAACAACTTCTATGTGTTCCATAATGGGGTATCTAGAAGGGGGCATTTGTTCAACTGGGATGATCATCCCTACCTTGTGGTTGATGCTGTGGAAAATGGGTGGTCTGGATTTGCTTTTACTAACTACAAGAGCAACAACATGCCATCTCATTCAAAAAGATTAAGTCTTTTGGGAGCATGTGGTGGTGGTGAGTATGGAAGAGAAAGTGAGGCTGAGATAAGTTGGGAAGTGTGCAATGGATCAGCAGAATATATGCAGAAGGTTAGGCTCAATCCTGAGTTGAAAAAGGTTCTTCACTCAAACAACTCTTCCAATATGAGTGTTGCTTCTGTCATTAGGACTGCTCTGCCTCTTCCTGGCCCTCCTTTGGGAAACTATGCCTTCCCACAAGAATCTTATTTTGAAATTACCATACTGTGTTCTGGTGTTGCCAATCATGAATTAGTTGTTGGAAAGAAAGAAGGGGAGAAGACAAAACTCCTGATTCAAGATAGTTCCAATGGTATAGGTGATTTGAATATGGTAGAAGAAGTGAAACTTGGGCAGAAAGAGGGTGGTGGAAAGAGTGGATCTGTGATGTTCTCATTGGGGTTAACAGCAGGAGGAGGTGTTCCTTTAAGAGTTCCTGGTAGCTACCCTAGGAGCATTGGATTCAACTCCAATGGTTCTGTATTTCTTGAAGGAATGAAACTTGTGATGGAGTCTGAGAAGGCACAATGGATAGGAAGTGAAAGGGTAATTGGATGTGGGTATGATCCAAGACAGAAAAAGGTTTTCTTCACATTGGACTCAGAATTGGTGCATGTAATCCACTGCCAGTCAGAGGAATTTGGCACTCCACTCTGTCCAACTTTGGCTGCAAATATAGACATTCAGGTTTTAGTTAATTTTGGACAAAGTGCATTCAAATATGCACCTGCAAATGCACAAAGAACACCAAATCCATGCTTCATAGCCCCACTTGTAAATTCCCCTGGTGCTACCCTTGGTTATGATGACAGCAAGGAACTCTTCTCCATGGGAAGGATTGATTCTCAGTGGCATAATAGATCTGCAAACAAAGCAAATCAACCCAATGGGAATAATAATAGTCAAGTCTTAGATTTTGATGAGTCTGAGGCTGATCTATTTGAAATAGTCTTGGATGGTTCATAA 1386 0.4192 MVQLIHVAVVAASLGCVSTLLLLFMWRLCHHKKEHRNFVEANSLTRMESLQAGIARLHQQQHPAVYHQFDHKNKNKGNNFYVFHNGVSRRGHLFNWDDHPYLVVDAVENGWSGFAFTNYKSNNMPSHSKRLSLLGACGGGEYGRESEAEISWEVCNGSAEYMQKVRLNPELKKVLHSNNSSNMSVASVIRTALPLPGPPLGNYAFPQESYFEITILCSGVANHELVVGKKEGEKTKLLIQDSSNGIGDLNMVEEVKLGQKEGGGKSGSVMFSLGLTAGGGVPLRVPGSYPRSIGFNSNGSVFLEGMKLVMESEKAQWIGSERVIGCGYDPRQKKVFFTLDSELVHVIHCQSEEFGTPLCPTLAANIDIQVLVNFGQSAFKYAPANAQRTPNPCFIAPLVNSPGATLGYDDSKELFSMGRIDSQWHNRSANKANQPNGNNNSQVLDFDESEADLFEIVLDGS* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0245 461 PANTHER RAN BINDING PROTEIN 9-RELATED 2 460 - -
Pvu1g0245 461 PANTHER SPLA/RYANODINE RECEPTOR (SPRY) DOMAIN PROTEIN 2 460 - -
Pvu1g0245 461 Gene3D - 142 389 IPR043136 -
Pvu1g0245 461 SUPERFAMILY Concanavalin A-like lectins/glucanases 284 381 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0245 Pvu-Chr1 2124713 2127337 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0245 1 2124713 2127337 Pvu1g0245 1 2124713 2127337 ECH
Pvu1g0245 1 2124713 2127337 Pvu9g0690 9 11458849 11461556 PCT