Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0244 ATGAACAATTCGATCATTCTCCACAACGCAAACGCAATCCACTTCAATTTCCACTCCGCATTATCACAAACACAACCAAGGCACCTTCCTTGGAACAAACACATAACTCAGCGTTACCCACGAATCCAATGTTGCTGCGTGGAAATCGACATGGTGAAGAACTCCCAAGGCATTTACGCCCCCAAAAGCGACAAGGTCGTCGTTCTCTGGGACCTCGACAACAAGCCCCCTCGCGGGCCCCCCTACGACGCCGCCGTTTCGCTCAAAACTCTCGCCGCCCGCTTCGGCGAGGTAACTGACTTCTCCGCCTACGCCAACCGCCACGCCTTCGTCCACCTCCCCCAGTGGGTCCTCCACGAGCGCCGCGAACGGAGAAGCCTCGACATCCTCGAACGAAAGGGTGTAGTCACGCCCTCGGAGCCCTACACGTGCGGGGTGTGTGGGCGCAAGTGCAAGACCCACATGGACCTGAAGAAGCACTTCAAGCAGCTGCACCAGCGCGAGCGGGAGAAGAAGCTGAACCGGTTGAAGTCGCTGAAGGGGAAGAAGAAACGGGACCGTTTCAAGGAACGGTTTTTGCGCGGGAATCATAAGTATAACGAGGCGGCGAGGACGCTGCTGGTGCCGAAGGTGGGGTACGGGCTGGCGGCGGAGCTTCGGCGGGCGGGGGTGTTTGTTAAGACGGTGGAGGACAAGCCGCAGGCGGCGGACTGGGCGTTGAAGAGGCAGATGGTGCATTCGATGAGTAGAGGGATTGATTGGCTGTTTTTGGTTTCGGATGATTCGGATTTTTCGGAGATGTTGAGGAGGGCGAGAGAGGCGGATTTGGGGACTGTGGTGGTGGGGGATTGGGATAGGGCTTTGGGGAGGCATGCGGATTTGTGGGTGCCTTGGAGTGCCGTTGAGAATGGGGAAGTAGATTTAGTGCCCAAGAGGAAGAAGAGAACAGAACATGGTTTTCAAAATGGCCATGATCGTGATGATTGGGGTGTTTTGAATGAGGATGAGGAATTGGGGCAAGAGTTTATGTTGCATAGTGAGGATGAGGATGAAAATGTGGAGAATTATTATTATGATGATGATGAAGAAGAAGAAGAGGAAGAGGAAGATGGGTTGTATATTTTTTGA 1128 0.5408 MNNSIILHNANAIHFNFHSALSQTQPRHLPWNKHITQRYPRIQCCCVEIDMVKNSQGIYAPKSDKVVVLWDLDNKPPRGPPYDAAVSLKTLAARFGEVTDFSAYANRHAFVHLPQWVLHERRERRSLDILERKGVVTPSEPYTCGVCGRKCKTHMDLKKHFKQLHQREREKKLNRLKSLKGKKKRDRFKERFLRGNHKYNEAARTLLVPKVGYGLAAELRRAGVFVKTVEDKPQAADWALKRQMVHSMSRGIDWLFLVSDDSDFSEMLRRAREADLGTVVVGDWDRALGRHADLWVPWSAVENGEVDLVPKRKKRTEHGFQNGHDRDDWGVLNEDEELGQEFMLHSEDEDENVENYYYDDDEEEEEEEEDGLYIF* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0244 375 PANTHER - 35 369 - -
Pvu1g0244 375 Coils Coil 162 182 - -
Pvu1g0244 375 PANTHER OS06G0166200 PROTEIN 35 369 - -
Pvu1g0244 375 ProSitePatterns Zinc finger C2H2 type domain signature. 144 165 IPR013087 -
Pvu1g0244 375 Gene3D - 59 300 - -
Pvu1g0244 375 ProSiteProfiles Zinc finger C2H2 type domain profile. 142 170 IPR013087 -
Pvu1g0244 375 CDD PIN_LabA-like 152 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0244 Pvu-Chr1 2118989 2120626 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0244 41 347 C2H2 Transcription Factor Family AT5G52010 66.984 1.65e-153 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pvu1g0244 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0244 1 2118989 2120626 Pvu1g0244 1 2118989 2120626 ECH