Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0243 ATGGCGAGACTCCCTCACCCTCTCAGTATCTTCACACAATTGCATTACTGGCGCCCACTTCTGTGTTGCCACTATGCCAAACGTGCCCTAACTGCCGGTACTAACTTCTCCTCCCTCACTACATTAGCCCGAACGGACAAATCACGAGAGGGAGGAACAACCACGGTTAAGCATTCAAGCAAAGCGAGAAGAAAAGCTTTCTATGAATCTCCGGAAGGGGTCTTATTGCGTAAGCTAAACCAGTGCTCATATGATGGAGATGTTATTCAAGCCCTTTGCCACTATGATGAGGCTAGAAAATTGGGGGTTCTACTCAACCTTGATCACTATAACAAATTGCTATACTTGTGTTCTGTTGAAAATGCTGAGGTTCCTCATTTGGGTCTCAAAAGGGGGTTTGAGATATTTCAGCAGATGTTGGATGACCGAGTTCAGCCCAATGAAGCCACCTTTACCAGTGCTGCTAGGCTTGCTGCTGCCAAGGAAGATCCTGATATGGCTTTCGAATTGCTAAAGCAGATGAAGAATGTTGCTATTGCTCCCAAGCTAAGATCGTATGAACCAGCTTTGTTTGGATTTTGCAAGAGGGGTGATGCTGAGAAAGCTTATCTAGTTGATGCTGACATGATTGAGTCTGGTATTGCGGCTGAGGAGCGTGAGCTTTCTGCTCTTTTGGAAGTCAGTGTCAAAACAAAGAAGGAAGACAAGGTGTATGAGATTTTGCACCGTTTGCGCGCAACAGTGAGACAGGTGTCTGAATCAACTTCACGGATAGTTCAGGACTGGTTTAACTCAGAATATGCTGCAAAAATTGGAAAGGAGAAGTGGGATGTTAACAAGGTGAGGGAAGGGATTCTTCAAGGAGGTGGAGGATGGCACGGTCAAGGGTGGCTTGGGAGTGGGCGATGGAAGATGGTGGACACTCAGGTGAACGAGGATGGTGTGTGTCTCTCGTGCGGTGAGAAGCTTGTAAGCATTGATGTTGATCCAAAAGAGACCGAAACTTTTGCTGCCTCATTATCTAAATTAGCTTGCCAAAAAGAAGCCAAGGCAAACTTTGTTCATTTTCAGAAATGGCTTGAGCGGCATGGCCCGTTTGATGCTGTTGTAGATGGTGCAAATGTAGGCCTTTCCAATGGGCATAATTTCAGCTTTTCGAGGCTTAATACTGTTGTTGAACAATTACGTCAAATAAGCCCTTCGAAGAGATTGCCCCTTATAATTTTGCATATAAGTCGGGTAAATGGTGGTCCCGCTCAAAATCCAAAAAACAGGAGACTTATAGAAAATTGGAAAAAAAATGGTGCTCTTTATGCTACACCTCAAGGTTCAAACGATGACTGGTACTGGTTATATGCTGCTGTTAGTTGTAAATGCTTACTGTTAACAGATGATGAGATGAGGGACCACTTGTTCCAACTACTGGGTTCTAGTTTTTTTCCGAGATGGAAGGAAAAGCATCAGGTTCGAGCATCAACTTCTGGAGGCTCCCTAATTATGCCTCCATGTTACTCTATAGTTATTCAGGAATCAGCCAATGGTAGCTGGCATGTGCCAACTGTAACTAGTGATGATCCAGAGATCCCAAGGAAATGGTTGTGTGCCACAAGATCCAAAAAAAATTCATTGCATAGTGTATGGACATCCTCCTCCAGGTCTGATTGCACATGA 1671 0.4446 MARLPHPLSIFTQLHYWRPLLCCHYAKRALTAGTNFSSLTTLARTDKSREGGTTTVKHSSKARRKAFYESPEGVLLRKLNQCSYDGDVIQALCHYDEARKLGVLLNLDHYNKLLYLCSVENAEVPHLGLKRGFEIFQQMLDDRVQPNEATFTSAARLAAAKEDPDMAFELLKQMKNVAIAPKLRSYEPALFGFCKRGDAEKAYLVDADMIESGIAAEERELSALLEVSVKTKKEDKVYEILHRLRATVRQVSESTSRIVQDWFNSEYAAKIGKEKWDVNKVREGILQGGGGWHGQGWLGSGRWKMVDTQVNEDGVCLSCGEKLVSIDVDPKETETFAASLSKLACQKEAKANFVHFQKWLERHGPFDAVVDGANVGLSNGHNFSFSRLNTVVEQLRQISPSKRLPLIILHISRVNGGPAQNPKNRRLIENWKKNGALYATPQGSNDDWYWLYAAVSCKCLLLTDDEMRDHLFQLLGSSFFPRWKEKHQVRASTSGGSLIMPPCYSIVIQESANGSWHVPTVTSDDPEIPRKWLCATRSKKNSLHSVWTSSSRSDCT* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0243 556 Gene3D - 328 500 - -
Pvu1g0243 556 Pfam Protein-only RNase P 310 534 IPR031595 -
Pvu1g0243 556 CDD PIN_PRORP-Zc3h12a-like 368 490 - -
Pvu1g0243 556 Gene3D Tetratricopeptide repeat domain 71 537 IPR011990 GO:0005515
Pvu1g0243 556 Pfam Pentacotripeptide-repeat region of PRORP 63 269 IPR033443 -
Pvu1g0243 556 PANTHER UNCHARACTERIZED 41 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0243 Pvu-Chr1 2113043 2117602 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0243 79 240 Miscellaneous Gene Families AT4G11690 25.153 1.15e-09 58.9