Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0241 ATGAAGGTGCATCAGTTGGCACGTGGATTCTGGGAGCATGAACCCTCCCTCACACTTGGGTGCAAACGCTTACGCCCCCTTGCCCCCAAGCTCTCCAACACCAACTCCACTACCTCTATCACTTCACCTCCTGTCACAACTTTCGACCTCAAGAGCTTCATCAAACCAGAAAGTGCCTCCATAAAACTTGGATCCTGTGACCACAATAAGAGAGACCCTACTTCACCTGAGGGCCAGGTGGAAACGCATATTCCAGGAGGGACACGGTGGAATCCGACTCAGGAACAGATAGGGATACTGGAGATGCTGTATAGAGGAGGGATGCGAACACCGAATGCTCAACAAATAGAGCACATCACAGTCCAACTTAGCAAGTACGGCAAGATCGAAGGGAAGAACGTGTTCTATTGGTTCCAAAACCACAAGGCACGCGAGAGACAAAAGCAGAAGCGTAACAACCTAGGCCTTGCTCATAGTCCTCGTACTCCCACCACACTACTGTCATCCTCCTTTAGTTGTAGTGTGATAACCTCCTTCGACACCACAAAACGGGGGGAGGGAGTAGAAAGAGATGAAGAAGATAGCCCTTTGAAGAAGTGTAGGAGCTGGGCATTTGAGTACTTGGAAGACCAAAGTTGGTCATCGTGGAAAGAGGAGGAACACAGAACTCTGGAGCTTTTCCCATTGCACCCGGAAGGCAGATGA 705 0.4993 MKVHQLARGFWEHEPSLTLGCKRLRPLAPKLSNTNSTTSITSPPVTTFDLKSFIKPESASIKLGSCDHNKRDPTSPEGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEHITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTLLSSSFSCSVITSFDTTKRGEGVERDEEDSPLKKCRSWAFEYLEDQSWSSWKEEEHRTLELFPLHPEGR* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0241 234 CDD homeodomain 88 149 IPR001356 GO:0003677
Pvu1g0241 234 Gene3D - 87 154 - -
Pvu1g0241 234 PANTHER WUSCHEL-RELATED HOMEOBOX 4 1 234 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Pvu1g0241 234 SUPERFAMILY Homeodomain-like 87 151 IPR009057 -
Pvu1g0241 234 MobiDBLite consensus disorder prediction 64 92 - -
Pvu1g0241 234 ProSiteProfiles 'Homeobox' domain profile. 93 148 IPR001356 GO:0003677
Pvu1g0241 234 SMART HOX_1 85 152 IPR001356 GO:0003677
Pvu1g0241 234 Pfam Homeodomain 88 147 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0241 Pvu-Chr1 2078561 2080574 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0241 1 154 Wox Gene Family AT1G46480 66.667 2.83e-64 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pvu1g0241 Homeodomain 2.6e-18 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0241 1 2078561 2080574 Pvu1g0241 1 2078561 2080574 ECH