Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0236 ATGGCTTTCCCTCAGCACCACTTCCAACGGCACTACCAAACCCAACAACAACAGCCACAAACCAAACCCTTCAGAAATCTGCAAGCAATCGATGGTCAGATGCCACAGCAGGTGGCGTTTTACAACCCTTCTGATTTGCAAGATCAGTCCCAGCACCCACCCTATATACCTCCCTTTCATGTTGTTGGGTTTGCTCCGGGTCCTCCTGCTGATGGCAGTGATGGTGGAGTTGATTTGCAATTGCAATGGAATTATGGTTTGGAGCCAGAGAGAAAGAGACTTAAAGAACAGGACTTTTTGGAGAACAATTCTCAGATATCTTCTGTTGATTTCCTCCAACCACGATCAGTGTCAACTGGGTTAGGCTTGTCACTCGACAATACTCGCCTGACATCCACTGGAGACTCAGCTTTGTTGTCACTCATTGGCGATGACATTGAGCGTGAGTTGCAGCAGCAGGATGTAGAGATAGATAGATTTCTCAAAGTGCAGGGTGAAAGACTGCGTCAATCGATCTTAGAAAAGGTTCAAGCAACACAACTTCAGAGTGTCTCACTCATCGAAGACAAAGTTCTTCAGAAACTTCGTGAGAAAGAAGCTGAGGTTGAAAGCATCAACAAGAGGAACATGGAACTCGAAGATCGAATGGAGCAGTTGACTGTGGAAGCTGGTTCGTGGCAGCAGCGAGCAAGATACAATGAAAACATGATTGCTGCTCTCAAGTTCAACCTTCAGCAAGCATATGTCCAAAGCAGAGATAGTAAAGAAGGATGTGGTGACAGTGAGGTTGACGACACAGCTTCTTGCTGCAATGGCCGTACCCTTGATTTTCATCTGCTTTCCAAGGAGAACACTGATATGAAAGATATGATGACATGCAAGGCTTGCAGAGTGAATGAAGTGACCATGGTTTTGTTACCTTGTAAGCATCTTTGCCTCTGTAAAGATTGTGAAAGTAAGCTTAGTTTCTGTCCTCTATGTCAATCCTCCAAATTTATAAGCATGGAGGTCTACATGTAA 1020 0.448 MAFPQHHFQRHYQTQQQQPQTKPFRNLQAIDGQMPQQVAFYNPSDLQDQSQHPPYIPPFHVVGFAPGPPADGSDGGVDLQLQWNYGLEPERKRLKEQDFLENNSQISSVDFLQPRSVSTGLGLSLDNTRLTSTGDSALLSLIGDDIERELQQQDVEIDRFLKVQGERLRQSILEKVQATQLQSVSLIEDKVLQKLREKEAEVESINKRNMELEDRMEQLTVEAGSWQQRARYNENMIAALKFNLQQAYVQSRDSKEGCGDSEVDDTASCCNGRTLDFHLLSKENTDMKDMMTCKACRVNEVTMVLLPCKHLCLCKDCESKLSFCPLCQSSKFISMEVYM* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0236 339 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 279 339 IPR013083 -
Pvu1g0236 339 PANTHER F2G19.2 1 339 - -
Pvu1g0236 339 PIRSF SBP1_RNase_bind 4 339 IPR017066 -
Pvu1g0236 339 Coils Coil 188 229 - -
Pvu1g0236 339 Pfam Zinc finger, C3HC4 type (RING finger) 291 329 - -
Pvu1g0236 339 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 339 IPR017066 -
Pvu1g0236 339 MobiDBLite consensus disorder prediction 1 22 - -
Pvu1g0236 339 ProSiteProfiles Zinc finger RING-type profile. 293 328 IPR001841 -
Pvu1g0236 339 MobiDBLite consensus disorder prediction 8 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0236 Pvu-Chr1 2030321 2033156 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0236 281 329 Miscellaneous Gene Families AT4G39050 40.816 3.81e-07 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0236 1 2030321 2033156 Pvu1g0236 1 2030321 2033156 ECH