Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0233 ATGGATTCCAAAGAACTATTTGGTGGCAATTACCTGCAGCTGAAGCCAGAAGAGGCAAGTGTGGTGGATCTTGGGATCCTCTTGTTCTCTTCTAAGTTGAGCAATAGAAAATTCATAGAATGCACAGAAGAGGTTGAAGCAAGAGATTTTCGACAAAGATGGCTCCTCTTCACATCTGTTGTGGCACAGATTCTCCTTCTTGCCACAAGAAACTCCTTCAAGAAGGTTGAGAACATCTTGGAGTTGTGGCTCAATCTTTTATCATTCAATGGAGGTTTCATAGGACTCTTCCTCAACTTTCTAAGAGGAAAGGTGAAAACAGCAGAGAGATCATCAGCATCATTCTTATCTGTGGTGGGGAACACTGACACACGAGTTGACTTAGACAAAAACATTAAACAAAATGATGCCAAATACAAAGGATTCATCTCAATGATGGCTTCAAAATTATCCTACGAGAATGAACAATTTGTTGGTAACACAGTGCGAAATCTTTGGAATATGGAGTTCATGGGGTTACACAGCTTCTGGAATGATTACCAAGAGCTGTGGTCCACACGAGCAATCATATTGCAAGATACAAAGTCCGAACCCAACTTGATTATTGTTGCATTCAGGGGTACAGAGCCATTTGATGCGGATCAATGGAGAACAGATGTGGATATCTCCTGGTACGAGTTGCCCAATATGGGTAGGGTACATGGTGGGTTCATGAAAGCTTTGGGTCTTCAGAAGAACAGTGGATGGCCCAAAGAGATTGATCAAAGGTCCCAGCATCGTTACGCCTACTATACAATCAGAGAGAAGCTGCGAACAATGTTGGAGGCAAATAGGGATGCAAAATTCATATTGGCAGGGCACAGTTTGGGAGGAGCCTTGGCCATTCTGTTTGCTGCTGTTCTCTCAATACATGAGGAGGCATGGCTGTTGGACAAGTTAGAAGGGGTTTATACATTTGGGCAGCCACGAGTTGGGGACATTAAGTTTGGGGAGTTCATGAAGGAGAAGTTGAGGAAGTATGATGTGAGATATATGAGGTATGTTTACTGCAATGATGTGGTGCCTAGGATCCCTTACGATGACAAAACCCTCTTCTTTAAACACTTTGGTCCTTGCCTCTACTTCAACAGCTTCTACAAAGGCCAGGTTCTAGAGGAGGAGCCAAACAAGAATTATTTTTCTTTGTTCTGGGTCATACCCAAGATCATAAACGCAGTTTGGGAGCTTATTAGAGGATTTCTTATCCCCTTCGTAGAAGGTGGAGGCTATATCCAGAATTGGTTCATGACGATAATCAGGATCGTTGGAATGATAATTCCAGGAATACCTGCTCATCTTCCTCCAGATTATGTCAATATAACCAGATTGGGATCCTTACCCGAATTTTCGGGACTTCAAAACTCGCAAGATTCCAAGGCTGACTGA 1425 0.4288 MDSKELFGGNYLQLKPEEASVVDLGILLFSSKLSNRKFIECTEEVEARDFRQRWLLFTSVVAQILLLATRNSFKKVENILELWLNLLSFNGGFIGLFLNFLRGKVKTAERSSASFLSVVGNTDTRVDLDKNIKQNDAKYKGFISMMASKLSYENEQFVGNTVRNLWNMEFMGLHSFWNDYQELWSTRAIILQDTKSEPNLIIVAFRGTEPFDADQWRTDVDISWYELPNMGRVHGGFMKALGLQKNSGWPKEIDQRSQHRYAYYTIREKLRTMLEANRDAKFILAGHSLGGALAILFAAVLSIHEEAWLLDKLEGVYTFGQPRVGDIKFGEFMKEKLRKYDVRYMRYVYCNDVVPRIPYDDKTLFFKHFGPCLYFNSFYKGQVLEEEPNKNYFSLFWVIPKIINAVWELIRGFLIPFVEGGGYIQNWFMTIIRIVGMIIPGIPAHLPPDYVNITRLGSLPEFSGLQNSQDSKAD* 475
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0233 474 SUPERFAMILY alpha/beta-Hydrolases 145 393 IPR029058 -
Pvu1g0233 474 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 5 463 - -
Pvu1g0233 474 Pfam Lipase (class 3) 202 361 IPR002921 GO:0006629
Pvu1g0233 474 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 5 463 IPR044819 GO:0004806|GO:0006629
Pvu1g0233 474 CDD Lipase_3 145 376 - -
Pvu1g0233 474 Gene3D alpha/beta hydrolase 122 396 IPR029058 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pvu1g0233 Pvu-Chr1 1983113 1987839 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0233 10 460 Acyl Lipid Metabolism Gene Families AT1G56630 53.731 1.22e-179 510
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0233 1 1983113 1987839 Pvu1g0233 1 1983113 1987839 ECH