Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0230 ATGGAAGACGGCGAAACGACGGAGGAGGTGGTTGTCGTTCCGGTTTCAAATAGCGACGGCGGTGGCGACGAGCTAATGTTTCCGCATTCCTCACGCGATTCGGACGAGGAATCTCCGCACGAATCGTTGCGTAACACGAAAGCTTCAATAGAGAACATCGTGGCTGAGATTCTCGCTCTGAAGAACCAGGCCAAACCCAAACCACTTCTCACTCTCCGACTCAGAGAGCTCCTCACTCAAACGTTCCTCCATTTCGTCACTCTTCGCCAGGCCAATCGCTCGATCTTGCTGGAGGAGGACCGTGCGAGAACGGAAACTGAGCGTGCGAAGGCGCCTCTGGAACTCACCACGCAGCAGCTTCAGAACCTGATGTACGAGAAGAGTCACTACGTGAAGGCGATAAAGGCGTGTAACGACTTAAAGTCCAAGTATCCTGATATTGAAGTGGTGTCGGAGGGCGAGTTTTTCCGTGACGCGCCGCAGGATATGAAGGACTCCGTCTTGTGCAGTCACAGTGAACATAATCTCGTGCTGAAGAGACTCAATTTTGAGTTATTTCAGCGCAAAGAGCTTTGCAAGCTTCATGACAAACTGGAGCAGAAAAAGAAAACCCTTCTGGAGGCAATTGCAAATCGAAAGAAGTTCTTGTCTAGCCTCCCTTCACATCTCAAGTCTCTTAAGAAAGCATCCTTGCCAGTACAAAATCAACTAGGAGTTCAGCATACTAAGAAACTAAAGCGGCATCATTCAGCAGAGTTGCTTCCTCCACCTCTTTATGTGGTTTATTCACAGCTGTTGGCCCAAAAGGAGGCGTTTGGAGAATCTATTGATGTGGAGATTGTAGGAAGTGTCAAAGATGCTCAATCTTTTGCCCACACTCAAGCTCACAAGGACACTGGCATTTCAACTACTGTAGAGAGTCCCAAATTAGAAAATAATGAACCTGATGAAGATGGTCAGACACTGAGTAAAAGGCCAAGGAGGTTTCAGGGCAAGGAGAGCCTTGACCAGGCAGGAATATTTCAAGTTCACCCACTTACAGTCAATCTCCATATCTATGATGAAGAGGTCTCTTATTTAGAGTCTGCAAAACTCATTACTCTAAATTTTGAGTACTTGATGCAGTTGAATATTATATGTGTTGGGATCAAAGCATCTAATGATGGTCCTGGGAATGACATCTTAAGCAATTTATTCCCTGATGACACAGGTCTCGAGCTTCCTCACCAGTCAGCTAAGCTCTATGTTGGGGATGCTGTAATGTTCAATCGCGATAGAACTTCACGTCCTTACAAATGGGCTCAGCACCTGGCAGGTATTGATTTCTTGCCTGAGATGGCTCCCTTGCTGTTTGCTAGACGTGAAACTCCAGACAATGGTGAAGGAGCCAAAGGTGAAGATTTCTTACCGAGTCTTTCACAATATCGCCAGCATAACCGATTACAGACAGTTCTGCAGAAAATTCGTTCAAGGATAAAAGCACGTTTGGTTCTTCAATAA 1500 0.462 MEDGETTEEVVVVPVSNSDGGGDELMFPHSSRDSDEESPHESLRNTKASIENIVAEILALKNQAKPKPLLTLRLRELLTQTFLHFVTLRQANRSILLEEDRARTETERAKAPLELTTQQLQNLMYEKSHYVKAIKACNDLKSKYPDIEVVSEGEFFRDAPQDMKDSVLCSHSEHNLVLKRLNFELFQRKELCKLHDKLEQKKKTLLEAIANRKKFLSSLPSHLKSLKKASLPVQNQLGVQHTKKLKRHHSAELLPPPLYVVYSQLLAQKEAFGESIDVEIVGSVKDAQSFAHTQAHKDTGISTTVESPKLENNEPDEDGQTLSKRPRRFQGKESLDQAGIFQVHPLTVNLHIYDEEVSYLESAKLITLNFEYLMQLNIICVGIKASNDGPGNDILSNLFPDDTGLELPHQSAKLYVGDAVMFNRDRTSRPYKWAQHLAGIDFLPEMAPLLFARRETPDNGEGAKGEDFLPSLSQYRQHNRLQTVLQKIRSRIKARLVLQ* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0230 499 Coils Coil 43 63 - -
Pvu1g0230 499 Coils Coil 188 208 - -
Pvu1g0230 499 MobiDBLite consensus disorder prediction 292 326 - -
Pvu1g0230 499 MobiDBLite consensus disorder prediction 26 44 - -
Pvu1g0230 499 PANTHER FMS INTERACTING PROTEIN 29 499 IPR019163 -
Pvu1g0230 499 MobiDBLite consensus disorder prediction 292 309 - -
Pvu1g0230 499 MobiDBLite consensus disorder prediction 1 44 - -
Pvu1g0230 499 Pfam Fms-interacting protein/Thoc5 87 442 IPR019163 -
Pvu1g0230 499 MobiDBLite consensus disorder prediction 310 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0230 Pvu-Chr1 1959410 1962776 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0230 1 1959410 1962776 Pvu1g0230 1 1959410 1962776 ECH
Pvu1g0230 1 1959410 1962776 Pvu9g0676 9 11211392 11217899 PCT