Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0224 ATGGAGGAAGTTGAAGACAAGCCACCCTCAGAACCATCTATAATAAGGGCTGAGCAGAAGCCACAGGCAGAAACCCCTGAAGAGAACACTGAGGCGATGAATCCACCCAATAATCAGCCTTCCATTGAAGTTTTGGATAGCCAACATAGTAATAATAACAGTAGAATGGAGTCTGGCCCTCGTTTTCCCATGGAGTTCTCTGACTCAGAAGTGTCCCTGAATGCTTCTAGCCATCAAACTATAGCACAAGTTGTACATCTTCCCACAGGTGATTCAGCTTCTACTCCTGAAGCTACAGTTCATGGAACAGAAGAAAGCCACCAAGGGGCCAAGGCTGCAGATTCTGAACCAGGAGCTTTAGAAGAAGGTATCTTCAACAGGCAGGAGGAAGGCGTTTCTGCTGTCACTGCTAGCAGTGATGTTGATAATCTGATGAATCCCTCAACATCATATTCTGAAAGAAAAGAGTTGCAGACTGGCCCCATAGAACTAATTACAGACTCACCTCAAACCATGGTTGCTGATGTTGCCATAGATAATTCAGCTTCAACCTCAAAAGTTGTAAAGGAACAAAGCAACCAAGGAGCCATGCCTGCAAATTCGGAAGCCGGAGCATTAGAAGATATGTCAAATAGGCAACAGGATGGTGGTTCTAGTGTCTGTGCTGGCAGTGATGCTGAAAATCAGAAAGAGTTGCAGAATGACCACAAAGAACTAAAGATTAATTCACCTCAAACAATGGATACTGATGTTCTTGTGGGAGCTGTTGATGACTCTTCAGAAAAAATAGAGTCGCAAAATGATCACAAAGAGCTAAAGATTGAACTGCCTCAAACCAAGATAGCTGATGTGTCTGTGGAAGCTGTTGACTCACCTGCTGCCAGTGATCAAAAGGCTTCCTCTTCTGAAGAAATAGAGTTGCAGAACGACCAGAAAGAACAAAACACAGATCCGTCTCAAACCAATACTTTGAGAGCTGATGATCAACTATCTGCCAGTGATGATAGTCTGATAAAACTCTTGGATCCCTCTTCTGAAAAAATAGAGTTGCAGAATGACCAGACAAATCAGAAGACAGATCCATCTCAAACCAATGTTACTGATACTTCTGTGGGAGCCGTTGACTCACCCACTTATGCCAAGAAGATGGCTGCAAGAAGAAGCCATATTGATACAGCTGCTCCATTTGAATCTGTCAAGGAAGCTGTTTCAAAGTTTGGAGGCATTGTGGATTGGAAGGCTCATAGAATCCAGACAGTGGAGAGACGCAAACATGTAGAACATGAACATGAAAAGGCACAGCAGCTGATCCCGGACTTCAGAAAAAAAGCCGAGGCTGCAGAGAAAGCAAAAATGCAAGTACTGCAGGAGCTGGATACCACTAAGAGACTAATAGAAGAGCTCAAACTTAACCTAGAGAGGGCTCAAACAGAAGAGCGTCAAGCAAGACAGGACTCAGAACTTGCAAAGCTGAGAGTGGAAGAGATGGAGCAAGGTATTGCAGATGACTCTAGTGTTGCAGCCAAGGCACAGCTTGAGGTAGCTAGAGCTAGGTATGCATCAGCTATCACAGAGTTAACATCAATAAAAGAAGAGTTGGATGCATTGCGTGGAGAATATGCATCCTTAGTTGATGAAAAAGAGGAAGCTGTCAAGAAATCTGAAGAGGCTGTTGCTTCATCAAAGCAAGTGGAGAAGACAGTGGAAGACTTGACTATTGAGCTGATTGCAACAAAGGAGGCACTGGAAACTGCACATGCTGCACACATGGAAGCAGAGGAACAGAGAATAGGGACAGTCATGGCAAGAGATCAGGATTGTCTCAGTTGGGAGAAGGAACTGAAACAGGCAGAAGAAGAACTCCAGAGTCTCAACCAGAAAATTTTGTCTGCTAAGGACCTCAAATCTAAACTGAACATTGCCTCAGCTTTGCTGCTTGATTTGAAAGCTGAGTTAAATCTTTATATGGAATCAAAGGCTGACCCAGAAGGTGAAGGAGAAGGAGAAGGAGTCTCCAAAAAGAAGACACACAGTGAAATACAGGAAGCAGTTGCATCTGCCAAAAAGGAACTTGAGGAAGTGAAGCTCAACATAGAGAAAGCTACCACTGAGATAAATTACTTAAGGGTGGCTGCAGCTTCCTTAAAATCAGAACTTGAAAATGAGAAATCATGTTTTGCCTCCATCAGGCAGAGAGAGGGAATGGCCTCCATCACAGCTGCATCTCTTGAAGCTGAACTGCAGAACACTATATCAGAAACGGTTTTGGTACAGATGAAGGAAAAGGAAGGCAGAGAGAAAATTGCTGTGCTGCCAAAGAAACTACAGCAAGAAGTTGAAGAGAATAATCAGGCCAAGTTGCTTGCTCAAGCAGCTCGTGAAGAGTTGCAGAGAGTAAAGGAGGAGGCTGAACAAGTAAAGGCAAGTGCAAGCACCATGCAAAGCAAATTACTAGCAGCTCAAAAGGAGATAGAAGCTGCAAGAGCTTCTGAAAGGTTGGCAATAGCAGCAACCAAAGCATTGCAAGAGAGTGAGGCATCACCTATGAACAACAGTGAAGTGGATTCATCCACTTGGGTGACCCTTTCGGTGGAGGAGTACTATAATCTCAGCAAACAAGCACATGATGCAGAAAAAGAATCCAACATGAGGGTTGCAACAGCAAATTCTGAAATTGAGACAGCCAAGAAGTCTGAATTGAAAACCTTGGAGAGGTTGAATAGTGTGAGTAGAGAAATGGCTGCTAGAAGGGAATCTCTTAAGATCGCCATGGAGAAAGCTGAAAAGGCAAGGGAGGGAAAATTAGGTGTAGAACAAGAACTAAGAAAGTGGAGGTCTGATCATGAACAACGAAGAAAGGCTGGTGCATTAGGCCAAGAATCGGCTAAGCATCAAAGTAGTAAAAGTGCAGGAGCTAGTTTTGAAAGACACAAGGAACCAAACAGTTTAGAAAAACCTCATCGTGTACCTATTCCTCTTCGTTACTTCTCCAGTTCAAAGTCTTATGTCCATTCAAACAGTGGAGCTGTGCCATCAACAGATGCAAAAACCGGAAAGAAGAAAAAGAAATCATTTTTCCCATGGGTTTTGATGTTCTTTGGGAAGAAAAAGTCGCACACAACACATTCAGGGTAA 3135 0.4348 MEEVEDKPPSEPSIIRAEQKPQAETPEENTEAMNPPNNQPSIEVLDSQHSNNNSRMESGPRFPMEFSDSEVSLNASSHQTIAQVVHLPTGDSASTPEATVHGTEESHQGAKAADSEPGALEEGIFNRQEEGVSAVTASSDVDNLMNPSTSYSERKELQTGPIELITDSPQTMVADVAIDNSASTSKVVKEQSNQGAMPANSEAGALEDMSNRQQDGGSSVCAGSDAENQKELQNDHKELKINSPQTMDTDVLVGAVDDSSEKIESQNDHKELKIELPQTKIADVSVEAVDSPAASDQKASSSEEIELQNDQKEQNTDPSQTNTLRADDQLSASDDSLIKLLDPSSEKIELQNDQTNQKTDPSQTNVTDTSVGAVDSPTYAKKMAARRSHIDTAAPFESVKEAVSKFGGIVDWKAHRIQTVERRKHVEHEHEKAQQLIPDFRKKAEAAEKAKMQVLQELDTTKRLIEELKLNLERAQTEERQARQDSELAKLRVEEMEQGIADDSSVAAKAQLEVARARYASAITELTSIKEELDALRGEYASLVDEKEEAVKKSEEAVASSKQVEKTVEDLTIELIATKEALETAHAAHMEAEEQRIGTVMARDQDCLSWEKELKQAEEELQSLNQKILSAKDLKSKLNIASALLLDLKAELNLYMESKADPEGEGEGEGVSKKKTHSEIQEAVASAKKELEEVKLNIEKATTEINYLRVAAASLKSELENEKSCFASIRQREGMASITAASLEAELQNTISETVLVQMKEKEGREKIAVLPKKLQQEVEENNQAKLLAQAAREELQRVKEEAEQVKASASTMQSKLLAAQKEIEAARASERLAIAATKALQESEASPMNNSEVDSSTWVTLSVEEYYNLSKQAHDAEKESNMRVATANSEIETAKKSELKTLERLNSVSREMAARRESLKIAMEKAEKAREGKLGVEQELRKWRSDHEQRRKAGALGQESAKHQSSKSAGASFERHKEPNSLEKPHRVPIPLRYFSSSKSYVHSNSGAVPSTDAKTGKKKKKSFFPWVLMFFGKKKSHTTHSG* 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0224 1044 Coils Coil 607 651 - -
Pvu1g0224 1044 Coils Coil 512 564 - -
Pvu1g0224 1044 MobiDBLite consensus disorder prediction 312 330 - -
Pvu1g0224 1044 MobiDBLite consensus disorder prediction 183 370 - -
Pvu1g0224 1044 Coils Coil 910 930 - -
Pvu1g0224 1044 MobiDBLite consensus disorder prediction 130 160 - -
Pvu1g0224 1044 Pfam Weak chloroplast movement under blue light 388 951 IPR008545 -
Pvu1g0224 1044 MobiDBLite consensus disorder prediction 1 77 - -
Pvu1g0224 1044 Coils Coil 677 711 - -
Pvu1g0224 1044 MobiDBLite consensus disorder prediction 183 199 - -
Pvu1g0224 1044 MobiDBLite consensus disorder prediction 926 990 - -
Pvu1g0224 1044 MobiDBLite consensus disorder prediction 206 228 - -
Pvu1g0224 1044 MobiDBLite consensus disorder prediction 347 370 - -
Pvu1g0224 1044 MobiDBLite consensus disorder prediction 229 243 - -
Pvu1g0224 1044 PANTHER WEB FAMILY PROTEIN-RELATED 362 1039 - -
Pvu1g0224 1044 PANTHER WEB FAMILY PROTEIN-RELATED 19 312 - -
Pvu1g0224 1044 Coils Coil 775 816 - -
Pvu1g0224 1044 MobiDBLite consensus disorder prediction 26 58 - -
Pvu1g0224 1044 MobiDBLite consensus disorder prediction 131 156 - -
Pvu1g0224 1044 Coils Coil 430 494 - -
Pvu1g0224 1044 MobiDBLite consensus disorder prediction 89 118 - -
Pvu1g0224 1044 MobiDBLite consensus disorder prediction 255 277 - -
Pvu1g0224 1044 MobiDBLite consensus disorder prediction 1002 1021 - -
Pvu1g0224 1044 MobiDBLite consensus disorder prediction 659 681 - -
Pvu1g0224 1044 MobiDBLite consensus disorder prediction 970 985 - -
Pvu1g0224 1044 MobiDBLite consensus disorder prediction 926 958 - -
Pvu1g0224 1044 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 19 312 - -
Pvu1g0224 1044 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 362 1039 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0224 Pvu-Chr1 1892502 1897476 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0224 1 1892502 1897476 Pvu1g0224 1 1892502 1897476 ECH
Pvu1g0224 1 1892502 1897476 Pvu9g0668 9 11137812 11144025 PCT