Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0223 ATGGAAGTTTCAAGTCTTCAAAAGTTGGTGAAGACAGCACCATCTAAAGCATTGGTCATCAGAATCAATCTGTTCTGTCTTGCCATCTTTCTGGTTGTTTATGCAGCCCTTCTTCTCCAACCATCTTCTTCTGTCTACTTTGAAAATGCAGCCTCCCTTGTTAGGTGCTCCTTGAGGGAGTGCCATCACAAGGAAGAAAAAGGCTTAAAGATGAAAGGGGTGTTGGAGGAACCAGAGGTGAAGCAGAGGATGCCAAAGCAGAATGCGAGTAAGATAGAGGTGCCTAGCTTCTTTGGTGAAATGGGGAAAGGAGTGAAGATGGGAATGGTGAACATGCATGAAGATGATGTGAGTGAATGGAGCAGCCTTGGAGAAACAACACAGGTTTATTTCGAAAGGGTATCAGAGTTTTTCAATTGGACAGATTTGTTTCCGGAATGGATAGATGAAGAGGAAGAGAGTGATGTTCCATCATGCCCCGAGATACCAATGCCAGATTTTGCAGCATATGAAACCATGGATGTGATCATAGCCAAGTTGCCTTGCAAGTACCCTCAAGAAGGCTGGGGAAGAGATGTTTTCAGGTTACAAGTTCATATGATTGTGGCGAATTTGGTGGTGAAGAAAGGGAAGAAGGATTGGAATTGGAAGACAAAGGTGGTTTTGTGGAGCAAGTGTAGGCCAATGATGGAGCTGTTTAGGTGCAAGGATTTGGTTAAGCAGGAAAATGAATGGTGGTATTATGAGGTTGATGTAAAGTGGTTGGAGCAGAAGGTATCTTTGCCTGTTGGGTCATGTAATTTGGCTCTGCCTCTGTGGGAACAAGGAATCGACAAGGTGTACGACACGTCGAACCTGGAACAGAGCGTTCAGAGCGAAGCTCGAGCGAAACGCGAGGCCTACGCAACGGTTCTTCACTCGTCGGAAGGCTACGTTTGCGGCGCAATAATGCTGGCGCAGACGCTCCTCCGTACCGGAACCAAACGCGACCTGGTGCTCCTCCTCGACAGCTCCATCTCCGCCGTCAAGCGCCGCGCCCTCGAGCTCTCCGGCTGGAAGATCCGAGTCATCACCCGGATCCGGAACCCGCGGGCCGAGAACGGCACCTACAACGAGTACAACTACAGCAAGTTCCGGTTGTGGCAGCTGACGGAGTACGAGAGGGTGATCTTCATCGACGCCGACATCATCGTCCTCCGCAGCCTCGACATCCTCTTCCATTTCCCCCAGTTGTCTGCCACCGGTAACGACCAGTCCATTTTCAACTCCGGCATCATGGTTCTCGAACCTTCCAACTGCACCTTCGATGTTCTCATGTCGCGCCGCCACGATGTCGTCTCCTACAACGGGGGAGACCAGGGTTTCCTGAACGAGATATTCGTGTGGTGGCACAGGCTTCCCCGGCGCGTGAACTTTCTGAAGAACTTCTGGGCGAACACGACGCTGGAGGCGAGTGTGAAGAACGCGATGTTCGGCGCGGAGCCTCCGAAGCTCTACGCGATCCACTACCTGGGCCTGAAGCCCTGGCACTGTTACAGGGACTACGACTGCAACTGGGACGTGGAAGATCAGAGGGTCTACGCCAGCGACGTCGCACACCGACGGTGGTGGAAGGTTCACGACTCCATGGATGAGCGGCTGCAGAGGCTCTGCCGGTTGACCCGAAAGAGAAGGACGGAGCTCAACTGGGAGAGGCGAAAGGCAGGGAAGCTAGGGTTAGCAGACATGCACTGGAAGATCAACGTGACAGATCCAAGAAGACAAGGCTCGCTTTTGATGGATTAG 1785 0.5193 MEVSSLQKLVKTAPSKALVIRINLFCLAIFLVVYAALLLQPSSSVYFENAASLVRCSLRECHHKEEKGLKMKGVLEEPEVKQRMPKQNASKIEVPSFFGEMGKGVKMGMVNMHEDDVSEWSSLGETTQVYFERVSEFFNWTDLFPEWIDEEEESDVPSCPEIPMPDFAAYETMDVIIAKLPCKYPQEGWGRDVFRLQVHMIVANLVVKKGKKDWNWKTKVVLWSKCRPMMELFRCKDLVKQENEWWYYEVDVKWLEQKVSLPVGSCNLALPLWEQGIDKVYDTSNLEQSVQSEARAKREAYATVLHSSEGYVCGAIMLAQTLLRTGTKRDLVLLLDSSISAVKRRALELSGWKIRVITRIRNPRAENGTYNEYNYSKFRLWQLTEYERVIFIDADIIVLRSLDILFHFPQLSATGNDQSIFNSGIMVLEPSNCTFDVLMSRRHDVVSYNGGDQGFLNEIFVWWHRLPRRVNFLKNFWANTTLEASVKNAMFGAEPPKLYAIHYLGLKPWHCYRDYDCNWDVEDQRVYASDVAHRRWWKVHDSMDERLQRLCRLTRKRRTELNWERRKAGKLGLADMHWKINVTDPRRQGSLLMD* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0223 594 PANTHER GLYCOGENIN SUBFAMILY MEMBER 7 588 - -
Pvu1g0223 594 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 297 546 IPR029044 -
Pvu1g0223 594 Pfam Glycosyl transferase family 8 369 510 IPR002495 GO:0016757
Pvu1g0223 594 CDD GT8_Glycogenin 299 543 - -
Pvu1g0223 594 SUPERFAMILY Nucleotide-diphospho-sugar transferases 299 548 IPR029044 -
Pvu1g0223 594 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 7 588 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0223 Pvu-Chr1 1884320 1888744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0223 71 593 Glycosyltransferase AT4G33330 66.038 0.0 742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0223 1 1884320 1888744 Pvu1g0223 1 1884320 1888744 ECH
Pvu1g0223 1 1884320 1888744 Pvu9g0667 9 11127875 11132797 PCT