Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu1g0222 | ATGCCTGTCATGCTCCCTCGTAACCAACCACGAAAGGCATTACCCGCGTCGTCGGCTATGCATAAGAAAAACATACCTGAGAAACTGCAGAAAATAATGGAAACGTTGAGAAACAGAGATGGTTTCTACAACAAGAGTGAACTCAAGAATGCCCTCAAAGAGCTAGGTGCCTACTTCCCTGGCTGGAGAGCCCACCGTGCTTTTGGAAAAGCTGATGACAACAACGACGGTCTAATTAGCGGCGAGGAAATCGACACTCTCCTTGAGTATCTTACTTCTTGTGGCTTTGGAAAATGA | 297 | 0.4646 | MPVMLPRNQPRKALPASSAMHKKNIPEKLQKIMETLRNRDGFYNKSELKNALKELGAYFPGWRAHRAFGKADDNNDGLISGEEIDTLLEYLTSCGFGK* | 99 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu1g0222 | 98 | SUPERFAMILY | EF-hand | 13 | 92 | IPR011992 | - | |
| Pvu1g0222 | 98 | Gene3D | - | 37 | 89 | - | - | |
| Pvu1g0222 | 98 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Pvu1g0222 | 98 | ProSitePatterns | EF-hand calcium-binding domain. | 72 | 84 | IPR018247 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu1g0222 | Pvu-Chr1 | 1852583 | 1853336 | Dispersed/Tandem |