Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0219 ATGCAAGCAGTGGGAAGGCTTGGCGGCTACATCAGCCGTGGCGTGTTCACTGTTTCAGGGCCGTTTCTTCCTTTTGGTGGGGCAGTGGACATTGTTGTGGTTCAGCAGAAAGATGGGAGCTTCAAATCCTCTCCTTGGTATGTTAGGTTTGGGAAATTCCACATGGGTTTGAAGGAAAAGGTGAAGGTTCATGTCAGTGTCAATGGTGTGGAGCCTGATTTCCATTTGTGTTTGAACCTTAAGGGGGAAGTTGTTTTCCGCCATGGAGACACACAAGACGAACAAGAAGGGGAATCAATAGTTGAGGGTGAAAGTGAAAGTGACAGTGATGGTATCATACCACAGGGTGGTTGTAGGCATTTCAAGTCCAGAAGTTGGAACTTTGATTCAGTGGACAAGTCAAATGAAGAGGCTAAGGTTGTTGGTAGAACTAGGTCTCGCCGCTCCCGAATTCTTGGGCTTGTGTCGAGGTCTTTGAGAGGGGAGGGTGAAGATGGTGATGTGAATTTCGTGGAGCGTGCTGAGATTGCAGCCAACTTGTTGGAGCTGAAGTGGTCCACCAATCTCAGTTTTGATCATCAACTACCTCGTACAGACAGGAAAAAGACAGAGGGTGAGGCCTTGTGCAATGGTTTACCTTTACCACCGTGTAAAATGAAGGAGGAGTCTTGTTCTTGCAGTGATCAAGAAGGTACCAGACCAAAGCATGTGTCCAATAAGATGTGCCCTGCAAGTGCAGGGTGTGGAGAAGTTCGTGTCATTGCTGAGGAGGTCTTGCAAGCTGCAACTCTAGTTCCACCTGAGGTTAAACAAAGTGTGGAAGTTACTAAGGATTTTGACATTGAGAGAACACAAATGGAGGCCTCTGTGTTACAATCTCAGCAAATAGAATGTTCCCATAATTGTATGTGTGCTGTCAGGGATGTTGGAGACACACCAAAGTTTCGAAAATCTCATACTGTTAATATTGGTCGAAGAGATTGTTCGATTAAGAATGTTAGAGAAAATACTCCAACGTCTGAACAACTTGAGTCCTTGAATCTGAAGGAAGGAAGGAACACAATAACCTTCAGTTTCTCTACAGCTATGGGGAAGCAGGAGGTTGATGCTCAAATATATTTGTGGAAATGGAATACTCGTATAGTGATATCAGATGTAGACGGGACAATTACAAAGTCAGATGTTCTAGGACAATTCATGCCATTAGTAGGAATCGACTGGTCACAAACAGGCGTTGCTCATTTATTCTCAGATATCAAGGAAAATGGCTACCAACTACTTTTTCTCAGTGCTCGTGCAATATCTCAGGCCTATCACACCAGACAATTTCTATACAACCTTAAGCAGGATGGGAAAGTTTTACCAGATGGCCCTGTTGTCATATCCCCTGATGGACTTTTTCCTTCTCTATATCGAGAAGTTATCCGGAGGGCTCCTCATGAGTTTAAAATTGCATGTTTAGAGGACATTAAGGCACTTTTTCCTCCAGATTGCAATCCATTCTATGCTGGTTTTGGCAATAGGGATACTGATGCAGTCAGCTACCTTAAGGTTGGAATCCCAAAAGGAAAAGTATTCATCATTAATCCAAGGGGAGAGATTGTTGTAAATAGTCGTTGCTTTGACACACAATCATACACCTCTCTGCATGCTCTTGTGAATGGAATGTTCCCCCCTACAAACTCATCTGAACAGGAGGATTTTAATTCATGGAATTACTGGAAATTACCTGAGACTCCTTCTGCTATGTGA 1752 0.4366 MQAVGRLGGYISRGVFTVSGPFLPFGGAVDIVVVQQKDGSFKSSPWYVRFGKFHMGLKEKVKVHVSVNGVEPDFHLCLNLKGEVVFRHGDTQDEQEGESIVEGESESDSDGIIPQGGCRHFKSRSWNFDSVDKSNEEAKVVGRTRSRRSRILGLVSRSLRGEGEDGDVNFVERAEIAANLLELKWSTNLSFDHQLPRTDRKKTEGEALCNGLPLPPCKMKEESCSCSDQEGTRPKHVSNKMCPASAGCGEVRVIAEEVLQAATLVPPEVKQSVEVTKDFDIERTQMEASVLQSQQIECSHNCMCAVRDVGDTPKFRKSHTVNIGRRDCSIKNVRENTPTSEQLESLNLKEGRNTITFSFSTAMGKQEVDAQIYLWKWNTRIVISDVDGTITKSDVLGQFMPLVGIDWSQTGVAHLFSDIKENGYQLLFLSARAISQAYHTRQFLYNLKQDGKVLPDGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIKALFPPDCNPFYAGFGNRDTDAVSYLKVGIPKGKVFIINPRGEIVVNSRCFDTQSYTSLHALVNGMFPPTNSSEQEDFNSWNYWKLPETPSAM* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0219 583 SUPERFAMILY HAD-like 373 526 IPR036412 -
Pvu1g0219 583 SMART lns2 381 537 IPR031315 -
Pvu1g0219 583 Pfam lipin, N-terminal conserved region 18 95 IPR007651 -
Pvu1g0219 583 MobiDBLite consensus disorder prediction 91 114 - -
Pvu1g0219 583 PANTHER LIPIN 291 578 IPR026058 -
Pvu1g0219 583 PANTHER LIPIN 1 222 IPR026058 -
Pvu1g0219 583 Pfam LNS2 (Lipin/Ned1/Smp2) 337 558 IPR013209 -
Pvu1g0219 583 PANTHER GH19076P 1 222 - -
Pvu1g0219 583 PANTHER GH19076P 291 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0219 Pvu-Chr1 1825946 1831592 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0219 1 1825946 1831592 Pvu1g0219 1 1825946 1831592 ECH
Pvu1g0219 1 1825946 1831592 Pvu9g0664 9 11106949 11115789 PCT