Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0217 ATGGCTGCCAGGAGTGAACACCAAACGGTTCCTCTTTCGGTGCTCCTTAAGCGTGAATTGGCTCATGAGAAAATTGAGAATCCTGAGATTGTTCATGGTCAAGCTTGCCAAAGCAAGAAAGGGGAGGATTTAACACTGGTTAAAACAGAATGCCAAAGGATGGTGGGGGATGGGGTCTCTACATATTCAGTTTTTGGGATGTTTGATGGACACAATGGATCTGCCGCTGCTATTTATACTAAGGAGAATCTTCTAAATAACGTTTTAAGCGCAATTCCTCCGGATCTTAACAGAGACGAGTGGATAGCAGCATTGCCCAGGGCTTTAGTTGCTGGCTTTGTAAAAACTGATAAAGATTTTCAAGAGAAAGGACAAAAATCTGGAACAACTGTCACCTTTGTGATTATAGAAGGTTGGGTTGTAACAGTGGCATCAGTTGGCGATTCCCGTTGTGTACTTGAATCTTCTGATGGTGAGATTTATTACTTGTCTGCAGATCACAGGCTAGACACGAATGAAGAGGAAAGGGTGCGAATCACCTCTAGCGGTGGTGAAGTTGGTCGGCTAAATACAGGGGGAGGTGCAGAGGTTGGTCCTTTGAGATGTTGGCCCGGTGGCTTGTGTCTCTCGCGATCTATTGGAGATATGGATGTTGGTGAATTTATTGTCCCTGTACCGCATGTAAAGCAAGTGAAGTTGCCCACTGCTGGAGGCCGGCTTGTTATCTGCAGTGATGGTGTTTGGGATTCTCTACCTGCAGAAGTAGCCCTTGATTGTTGTCGTGGCATGTCACCTGATGCCGCAGCACCGCATATTGTTAAAGAAGCTGTACAAGCAAAGGGACTTAGAGATGATACAACCTGCATCGTTGTTGATATATTACATCTGGAGAAGCCATCTGTTTCTGCACAAACAAGGAGGCCGGTAAAAGGAATGCTCAAGTCCATGTTTCGTAAAAAGTCTTCTGAATCATCTTCTTGTCACGACAAAGAGTACGCTGAGCCAGATGTTGTGGAGGAATTGTATGAAGAAGGATCTGCCATGCTTTCTGAGAGGTTCGATACTAAATATCCAGTCTGCAACATGTTTAAGTTGTTTATGTGTGCAGTATGCCAAGTAGAGATAAAACCTGGAGAGGGCATTTCAATACATGAGGGTGCATCCAATTCTACAAAATTTCGTCCCTGGGACGGACCTTTCCTGTGCTCAAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAAAGATCATTAGGTAGACTTAGCAGTGGAAGTGACGACTGA 1284 0.4478 MAARSEHQTVPLSVLLKRELAHEKIENPEIVHGQACQSKKGEDLTLVKTECQRMVGDGVSTYSVFGMFDGHNGSAAAIYTKENLLNNVLSAIPPDLNRDEWIAALPRALVAGFVKTDKDFQEKGQKSGTTVTFVIIEGWVVTVASVGDSRCVLESSDGEIYYLSADHRLDTNEEERVRITSSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDVGEFIVPVPHVKQVKLPTAGGRLVICSDGVWDSLPAEVALDCCRGMSPDAAAPHIVKEAVQAKGLRDDTTCIVVDILHLEKPSVSAQTRRPVKGMLKSMFRKKSSESSSCHDKEYAEPDVVEELYEEGSAMLSERFDTKYPVCNMFKLFMCAVCQVEIKPGEGISIHEGASNSTKFRPWDGPFLCSSCQEKKEAMEGKRSLGRLSSGSDD* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0217 427 PANTHER ALPHABET, ISOFORM E-RELATED 2 421 - -
Pvu1g0217 427 Gene3D - 30 299 IPR036457 -
Pvu1g0217 427 CDD PP2Cc 39 293 IPR001932 -
Pvu1g0217 427 SMART PP2C_4 21 291 IPR001932 -
Pvu1g0217 427 Pfam Protein phosphatase 2C 57 277 IPR001932 -
Pvu1g0217 427 SMART PP2C_SIG_2 46 293 IPR001932 -
Pvu1g0217 427 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 2 421 - -
Pvu1g0217 427 ProSiteProfiles PPM-type phosphatase domain profile. 21 293 IPR001932 -
Pvu1g0217 427 SUPERFAMILY PP2C-like 38 293 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0217 Pvu-Chr1 1802059 1807071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0217 1 426 PP2C-type Phosphatase Gene Family AT1G47380 77.570 0.0 700
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0217 1 1802059 1807071 Pvu1g0217 1 1802059 1807071 ECH
Pvu1g0217 1 1802059 1807071 Pvu9g0662 9 11088394 11093506 PCT