Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0208 ATGGAGAGATCAAAATCATCCGTTGAACAAATTCAGCCTCCAACTTATGGAAACTTAGTGACCATTCTTAGCATCGATGGTGGTGGCATCAGGGGCATCATCCCCGCCACCATTATTGATTTCCTCGAGTCTCAGCTTCAGGAGTTGGATGGTCCAGAGGCAAGGCTTGCAGATTACTTTGATGTGATCTCAGGAACAAGCACGGGAGGTCTTGTAACAGCCATGCTAACTGCTCCTGACAACAACCATCGACCACTTTTTGCTGCCAAAGACATCAAGCCCTTTTACTTGGAACACGGTCCTAAGATTTTCCCACACCACAGTGGGCTTGGTGGAACTATAATAGCAAATTTGGTAAGATCTTTGGGAGGACCCAAATACGATGGGAAATACCTTCATGAGGTGGTGAGAGAGAAACTCGGAGAGATTCGGTTGCATGACACTCTCACCAACGTTGTGATTCCCACCTTCGACATCAAGTCTATGCAACCCATTCTTTTTTCTTCTTATCAGATGAAGAAGTGTTCTTACATGGATGCTAAACTCTCAGACATCTGCATAGGCACCTCCGCTGCACCTACTTATCTGCCTGCACACACTTTCACTAACCAAGACTCCCAAGGGAACCTACACCAATTCAATCTCATTGATGGCGGCGTTTGTGCAAATAACCCGACCCTAGTTGCCATGAACGAAGTTACGAAGCAAATCATAAAGCAAAATTCAGATTTCTTTCCCATCAAGCCTCTGGAATATAGTCGGTTCCTGATAATTTCAATAGGCACTGGAACAGCAAGAAATGAGGAAAAATTCAATGGTGAAACTGCAGCAAAATGGGGTTTATTGGATTGGCTAACCTACAATGGGAGTACTCCATTGACAGACGTTTTCACGCAGTCGAGTGCAGACATGGTTGATTTCCATTTATCTGCTGTGACTCAAGCACTTCACTCTGAAGATAATTACCTTCGAATTCAGGATGACACCTTGAGTGGAACGGAATCTTCGGTTGACATTGCTACCAAGGAGAATCTGCAGAAGCTTAGTGAGATTGGTCAAAACCTGTTGAAGAAATCAGTCTCTAGGGTGAATTTAGAGAATGGTCTCTTTGAGCCACTCGCCAACGGGGAAACTAATCAACACGCTCTCACAAGGTTTGCAAAAATACTGTCTCAGGAGAGGAGGCTCCGTGAGATGAGATCCCCACACACTACAAAGAATAAGAAACCCCTCGTCTTCTAG 1242 0.4477 MERSKSSVEQIQPPTYGNLVTILSIDGGGIRGIIPATIIDFLESQLQELDGPEARLADYFDVISGTSTGGLVTAMLTAPDNNHRPLFAAKDIKPFYLEHGPKIFPHHSGLGGTIIANLVRSLGGPKYDGKYLHEVVREKLGEIRLHDTLTNVVIPTFDIKSMQPILFSSYQMKKCSYMDAKLSDICIGTSAAPTYLPAHTFTNQDSQGNLHQFNLIDGGVCANNPTLVAMNEVTKQIIKQNSDFFPIKPLEYSRFLIISIGTGTARNEEKFNGETAAKWGLLDWLTYNGSTPLTDVFTQSSADMVDFHLSAVTQALHSEDNYLRIQDDTLSGTESSVDIATKENLQKLSEIGQNLLKKSVSRVNLENGLFEPLANGETNQHALTRFAKILSQERRLREMRSPHTTKNKKPLVF* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0208 413 Pfam Patatin-like phospholipase 23 230 IPR002641 GO:0006629
Pvu1g0208 413 PANTHER PATATIN 1 406 - -
Pvu1g0208 413 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 23 230 IPR002641 GO:0006629
Pvu1g0208 413 SUPERFAMILY FabD/lysophospholipase-like 18 367 IPR016035 -
Pvu1g0208 413 PANTHER XYLOSE ISOMERASE 1 406 - -
Pvu1g0208 413 CDD Pat17_isozyme_like 17 368 - -
Pvu1g0208 413 Gene3D Cytosolic phospholipase A2 catalytic domain 9 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0208 Pvu-Chr1 1751687 1753884 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0208 11 404 Miscellaneous Gene Families AT2G26560 63.706 0.0 514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0208 1 1751687 1753884 Pvu1g0208 1 1751687 1753884 ECH