Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0206 ATGGATGGTACCAATGGGATTGGTTCTGAAACTCCAAGCAACAGTGATGAAGGACACATGGTTACTCTTCTCAGTATTGATGGTGGTGGCATTCGGGGAATCATTCCAGGAGTTATACTGGGTTTCCTCGAATCAGAGCTTCAGAAGCTGGATGGTGATGATGCAAGGCTGGCAGACTACTTTGATGTGATTGCAGGAACAAGCACCGGAGGATTAGTCACTGCCATGCTCACTGCTCCAAATGAAAATAACAGACCCTTGTATGCAGCCAAAGACATTAAGGATTTCTACCTTGAACATACCCCTAAAATCTTCCCACAGAACAAAGGCTGGAATTTGATCTCATCGGTGATGAAGTTGAGCAGAACTTTGTTGGGACCACAGTACGACGGCAAGTATTTACACAACCTCGTTAGGGAAAAACTAGGAGACATCAAACTGCACCAGACCTTAACCAATGTCGTTATCCCAGCCTTTGACATCAAACACCTTCAACCCACCATCTTTTCCAGCTTCCAGGTGAAGAAGAGGCCACATTTGAATGGAAAGTTGTCGGATATATGCATTTCAACTTCTGCAGCACCAACCTATCTTCCAGCTCATTCCTTTGAAACCGAAACCAACAAAGGTGCTTTCAAATTCGAGCTTATAGACGGTGGTGTAGCAGCAAATAACCCGGCACTGGTGGCGATGGCAGAAGTGTCGAACGAAATTTGCCATGAAGGGTCATGTGGAAGCGTGAATGTGAAACCGCTGCAATACAAAAAGTTTTTGGTGATATCATTGGGAACAGGTTCTCAGACACAAGAAATGAGATACAGTGCTGCTGCTGCATCTAACTGGGGCATCGTGGGTTGGGTTACCAACAGCTATGGCAACCCTCTCATCGATGCCTTCTCTCATGCCAGTTCTGACATGGTTGATTTCCACATCTCCTCCGTTTTCCAAGCACGCCGTTCTGAACACAACTATCTCCGAATCCAGGACGATACTTTAACTGGGGACTTATCTTCTGTTGACATGGCCACGGAGAAGAATTTGAAAGGTCTCGTCCAAGTTGCGGAAGAACTGTTAAAGAAACCAGTTTCAAAGATTAACTTGATGACTGGTATTCATGAACCTGCTGATTCTCACGAAACAAACGCAGATGCCTTGAAGAGGTTTGCGGAACGACTATCCAGACAGAGGAGATTTCGTAAGTCTGAGATGTCTGCAAATAAATGA 1224 0.4518 MDGTNGIGSETPSNSDEGHMVTLLSIDGGGIRGIIPGVILGFLESELQKLDGDDARLADYFDVIAGTSTGGLVTAMLTAPNENNRPLYAAKDIKDFYLEHTPKIFPQNKGWNLISSVMKLSRTLLGPQYDGKYLHNLVREKLGDIKLHQTLTNVVIPAFDIKHLQPTIFSSFQVKKRPHLNGKLSDICISTSAAPTYLPAHSFETETNKGAFKFELIDGGVAANNPALVAMAEVSNEICHEGSCGSVNVKPLQYKKFLVISLGTGSQTQEMRYSAAAASNWGIVGWVTNSYGNPLIDAFSHASSDMVDFHISSVFQARRSEHNYLRIQDDTLTGDLSSVDMATEKNLKGLVQVAEELLKKPVSKINLMTGIHEPADSHETNADALKRFAERLSRQRRFRKSEMSANK* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0206 407 CDD Pat17_isozyme_like 18 370 - -
Pvu1g0206 407 Pfam Patatin-like phospholipase 24 231 IPR002641 GO:0006629
Pvu1g0206 407 Gene3D Cytosolic phospholipase A2 catalytic domain 10 405 - -
Pvu1g0206 407 PANTHER XYLOSE ISOMERASE 15 404 - -
Pvu1g0206 407 PANTHER PATATIN 15 404 - -
Pvu1g0206 407 SUPERFAMILY FabD/lysophospholipase-like 20 382 IPR016035 -
Pvu1g0206 407 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 24 231 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0206 Pvu-Chr1 1738878 1742766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0206 18 399 Miscellaneous Gene Families AT2G26560 62.141 3.36e-167 473
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0206 1 1738878 1742766 Pvu1g0206 1 1738878 1742766 ECH
Pvu1g0206 1 1738878 1742766 Pvu9g0655 9 11041332 11044632 PCT