Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0200 ATGAGTCGAATGTTGTCCATGAAAGTTGTTGTGTGGTTCATGTTTTTGTCTTGGTGGCAGTTTGCGATGCCATGTGAGGGGAACCAACAAGGGGAATATCTGTACAAGTTAATTCGATCAAAGAGGGGTGAGAAAGTGAGGTCAGAAGAAGCTTCAATGGCGACAAAGATTGGTGATGGAGAAATTTGGAAGGTTGAGGAAGAAAGGGTGTTGATGGAAGATGACAAGGTGAAGGGTTTGCCGGGAGAACCAGAAGGGGTGGATTTTGATCAGTATGGTGGCTATGTAACTGTGGATGCCAAAGCAGGAAGAAGATTGTTCTACTACTTTGTTGAGTCACCTCACAATGCTTCCAACAAGCCCCTTGTTCTATGGCTCAATGGAGGACCTGGGTGCTCTTCCCTTGGATATGGAGCCATGCAAGAATTAGGACCTTTTAGAGTGAACAGTGATGGAAGAACACTTCGCAAAAATGAATATGCATGGAACAATGTGGCAAATGTTATTTTCCTAGAGTCTCCAGCAGGAGTTGGATTCTCATATTCAAACACTTCTTCTGACTACTCTGACAGTGGAGACAAGAGCACAGCCATGGACTCTTACACTTTTCTCATAAACTGGCTCAACAGATTTCCACACTACAAATCTCGAGACTTGTTCATCACTGGAGAAAGCTATGCTGGACATTATGTCCCTCAGCTAGCTCACACTATTCTCACTCATAATAACCTCACAAATCACACACTTCTTAACCTCAAAGGGGTTGCGATTGGAAATGGTTGGATAGATGATAATATGTGTGGAAAAGGAATGTATGAGTATTTCTGGACACATGCTATGAACTCTGATGAAACTCATGAAGGAATTGAAAGGCATTGTGACTTTGAGAGTGGGAACTTAACAAGTGAATGCAACAAATATCAAAGAAGAGGGGATGATGAGATTGGAGTGATTGACATTTATGACATATATGCTCCCCTCTGTGATCCAGCTGCTCAAACTCCACCTTCTGACAGCAATTTCGACCCTTGTTCTGACGAATATACCAAATCCTACTTAAATCTGGCCCAAGTACAAGAGGCTCTTCATGCTAAAGTCTCAGAATGGTCTTCTTGCAGTCCGGTGGGATGGACAGATAGCCCAGCAACAATTCTACCCACTATAAGTGGGTTAATATCAAGTGGCATAAGAACATGGATATATAGTGGTGATACAGATGGGCGTGTTCCCATAACATCGTCTAGGTATTCAGTAAATGCCTTGAAACTTCCAGTGGAGACAACATGGCGTCCATGGTATTCTGGAAATGAGGTCGGAGGATACTTGATTGGGTACAAAGGGCTAACCCTCATCACTGTAAGAGGAGCTGGCCACATGGTTCCAAGTTACCAACCAAAGCGAGCGTTAACCATGATCTCTTTTTTTCTTCAGGGAGAACTTCCTCCCGAATCAAACTCTTAG 1461 0.4326 MSRMLSMKVVVWFMFLSWWQFAMPCEGNQQGEYLYKLIRSKRGEKVRSEEASMATKIGDGEIWKVEEERVLMEDDKVKGLPGEPEGVDFDQYGGYVTVDAKAGRRLFYYFVESPHNASNKPLVLWLNGGPGCSSLGYGAMQELGPFRVNSDGRTLRKNEYAWNNVANVIFLESPAGVGFSYSNTSSDYSDSGDKSTAMDSYTFLINWLNRFPHYKSRDLFITGESYAGHYVPQLAHTILTHNNLTNHTLLNLKGVAIGNGWIDDNMCGKGMYEYFWTHAMNSDETHEGIERHCDFESGNLTSECNKYQRRGDDEIGVIDIYDIYAPLCDPAAQTPPSDSNFDPCSDEYTKSYLNLAQVQEALHAKVSEWSSCSPVGWTDSPATILPTISGLISSGIRTWIYSGDTDGRVPITSSRYSVNALKLPVETTWRPWYSGNEVGGYLIGYKGLTLITVRGAGHMVPSYQPKRALTMISFFLQGELPPESNS* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0200 486 Pfam Serine carboxypeptidase 81 477 IPR001563 GO:0004185|GO:0006508
Pvu1g0200 486 SUPERFAMILY alpha/beta-Hydrolases 77 479 IPR029058 -
Pvu1g0200 486 Gene3D alpha/beta hydrolase 71 330 IPR029058 -
Pvu1g0200 486 ProSitePatterns Serine carboxypeptidases, histidine active site. 448 465 IPR033124 GO:0004185
Pvu1g0200 486 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 480 IPR001563 GO:0004185|GO:0006508
Pvu1g0200 486 Gene3D - 384 478 - -
Pvu1g0200 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 170 IPR001563 GO:0004185|GO:0006508
Pvu1g0200 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 181 IPR001563 GO:0004185|GO:0006508
Pvu1g0200 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 207 232 IPR001563 GO:0004185|GO:0006508
Pvu1g0200 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 448 461 IPR001563 GO:0004185|GO:0006508
Pvu1g0200 486 ProSitePatterns Serine carboxypeptidases, serine active site. 221 228 IPR018202 GO:0004185
Pvu1g0200 486 PANTHER CARBOXYPEPTIDASE 33 480 - -
Pvu1g0200 486 Gene3D - 344 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0200 Pvu-Chr1 1673752 1679089 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0200 349 479 Calmodulin-binding Proteins AT2G22960 29.412 2.75e-14 69.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0200 1 1673752 1679089 Pvu1g0200 1 1673752 1679089 ECH