Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0199 ATGCAGGGAAGCTCGAGAATTGCAAGTAAAAGTGGAAAAGCCTCAAGCAGAGAAAGAAAATTGGCTTTGAAACAAGATGTGGATAGGTTGAAGAAGAAGCTTAGGCATGAAGAGAACATTCATAGAGCATTGGAGAGGGCTTTCAACAGGCCATTGGGAGCTTTGCCTCGTCTTCCTCCATATCTCCCTCCATATATACTAGCTCTTCTGGCTGAAGTGGCGGTTCTGGAAGAGGAAATTGTTAGGCTTGAAGAGAAGGTTGTGCATTTCAGACAGGATTTGTACCAGGAAGCTGTCTACATGTCATCTTCTATGAGGAAACTTGAACATTCAGTTTCAGCTCCTCCAAACAAGTCAAATTCAACCATGGATAGTCCCAAGTTGGAAAAATTGAAGCTTCAATCCCAAACAGTTGGTAATTCAGCTGCAGAATCTGCAACAAGGCCTACCACAACTCTCACAGAGGATAAGGAGAATCAATCCTGTAGTAATTCTTCCAAGAGCAGGAACCAATCATCCAACCATATGAACAAATATGCAATCAAAAGACTTCACAATAAATCACCCCAGAAAAGGTTGGATCATCCAAAAATAAAGCAAGAACCAAGGTTGAACAGCCAGCAAATTGCAGATTTGAGAAACCATAGTCCACATAAAAGTTCATCAGAAGCTGAGAGACCAAATATAATTTCGGAAAATATTGTGAAGTGCTTATCAAGCATTCTCATGAGAATGAGTGCTGTGAAGAATCCAGGTTCTGCATGTGACATTCCACACTTGTGGGATCTAAAACCCAAAATGTGTGATGAAGAAACAGTGTTTGGGGATCCATATGGCATCTGTTTGGAATTTGGGAAGAGGGATATTGGTCCATACAAGCAATTATGTGCAATTGATGCTAAATCTTTCAATCCAAAACGAACTGCAAATACTTTGTTTTTACTACACCGTTTGAAACTTCTTTTTAGGAAACTAGCCTCTGTCAACCTAGAAAACCTCAACCATCAGGAGAAGCTTGCATTCTGGATAAACATCTACAACTCCTGTATGATGAATGCATTCATAGAAAATGGCATACCAGAAAGTCCTGAAATGGCTGTTGCACTGATGCGGAAGGCAACAATAAATGTGGGTGGACACGTGCTAAGTGCAACAACCATAGAGCATTTCATTCTTAGACTTCCTTATCATTGGAGATTTACCTTTTCCAAGGGAACAAAAAATCATGAAATGACAGCAAGAAGCATGTATGGACTGGAACTGTCAGAACCTCTAGTGACATTTGCTCTCTCTTGTGGAACATGGTCCTCTCCTGCTGTGAGAGTTTACACTGCATCCCAGGTTGAGAATGAACTGGAAGTGGCCAAAAGAGAGTTCTTACAGGCAGCAATTGGATTTTCAACTTCAAAGTTTTCTGTCCCTAAGTTACTGGATTGGTATTTGCTGAACTTTGCAAAAGACTTGGAATCATTGCTGGACTGGATCTGCCTCCAATTACCAAGTGAACTGGGGAAACAAGCCATAAAACTCCTAGAGGAAAGAAAAACTGAGCCCCTCTCACAATTTGTACAAATAATGCCATATGATTTCAGCTTTAGATACTTGATATGCACATAA 1617 0.4057 MQGSSRIASKSGKASSRERKLALKQDVDRLKKKLRHEENIHRALERAFNRPLGALPRLPPYLPPYILALLAEVAVLEEEIVRLEEKVVHFRQDLYQEAVYMSSSMRKLEHSVSAPPNKSNSTMDSPKLEKLKLQSQTVGNSAAESATRPTTTLTEDKENQSCSNSSKSRNQSSNHMNKYAIKRLHNKSPQKRLDHPKIKQEPRLNSQQIADLRNHSPHKSSSEAERPNIISENIVKCLSSILMRMSAVKNPGSACDIPHLWDLKPKMCDEETVFGDPYGICLEFGKRDIGPYKQLCAIDAKSFNPKRTANTLFLLHRLKLLFRKLASVNLENLNHQEKLAFWINIYNSCMMNAFIENGIPESPEMAVALMRKATINVGGHVLSATTIEHFILRLPYHWRFTFSKGTKNHEMTARSMYGLELSEPLVTFALSCGTWSSPAVRVYTASQVENELEVAKREFLQAAIGFSTSKFSVPKLLDWYLLNFAKDLESLLDWICLQLPSELGKQAIKLLEERKTEPLSQFVQIMPYDFSFRYLICT* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0199 538 MobiDBLite consensus disorder prediction 133 179 - -
Pvu1g0199 538 PANTHER TRANSCRIPTION FACTOR 2 537 - -
Pvu1g0199 538 Pfam Leucine-zipper of ternary complex factor MIP1 16 97 IPR025757 -
Pvu1g0199 538 Coils Coil 13 47 - -
Pvu1g0199 538 Coils Coil 66 93 - -
Pvu1g0199 538 MobiDBLite consensus disorder prediction 133 226 - -
Pvu1g0199 538 MobiDBLite consensus disorder prediction 1 22 - -
Pvu1g0199 538 PANTHER EXPRESSED PROTEIN 2 537 - -
Pvu1g0199 538 Pfam Protein of unknown function, DUF547 331 460 IPR006869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0199 Pvu-Chr1 1655260 1659533 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0199 1 1655260 1659533 Pvu1g0199 1 1655260 1659533 ECH
Pvu1g0199 1 1655260 1659533 Pvu9g0649 9 10969154 10973201 PCT