Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0196 ATGACTCTTTCTCCGAACTCGCTTTCCGCCGGACCCCATCAACATGCTCCGCCGCGCCGCTTGACCCGCCAGAGGAAGCTCCACCACCTCACCGACCATGACATTGGTTTCTTCTCCTTCCACTCCGCCAACTCTTCTTCGTCTTTTTCTCTCTCGCCGGAGCCCCGCTCCCACGCCGCTTCCGACCACCGCTCCTTCTCTTCCCTGCCGCAACCCCTGCCTCTTCCCGTAGCGCCGTCCACCCGTCGGGCCTGGTCTGTCGGCCCCGGTTCCTCACATCCTCCCCTCTCTCCTCCCTTAGAACATCGTAGTTTTTCTTCTTCCGGGAAGGCATTGCCTCATGATGTAGTGACACGTACAAAACCTACACTCCATTTGGATTCTACTCTTGCAAATTCAAAATGCAATCTGAGAGAGCATATTCCTGCAGCAAATTTCGTGACAGATCATAGTTCATTGATAAACCGAAGAGCAGTGTCTCATGGTTATGACTCGGAAGGTAATCCCCACTTGCATTTGGGTGTTTGTGCCAAGCCCAAGAGTGCTCCAACAAGTGTGGTCACTAGTCCTGATACTAGTCCATATAGATCAAATAATAGAGATTTCTTTGATCCTACCTTCACCTTCTCTTTGGAAGTTAATGACAAATTGAGAATGTTATCAGCTAAAAGTGTACACAGTCTAGACCATTCCCCTATTCAGTGCCCACTAAGCCTCACTCGTCACTTCAATCCTAAAATTGAGGAGGGATCTCAGAGCAATAAATTCTTGTCCAAGGTGAGTCCTGAAAATAACCATGTTGATGCACATCCCTTGCCTCTTCCTCCTAGAGCTTCACCGCCTGCACAATTATCTGTGCTGCATCAATCAAGTACCATCTATCACGCTACTGAAAGTATACCTTCAGTCAAAGGTCAATGGCAGAAAGGAAAACTTATTGGACGAGGAACCTTTGGAAGTGTTTTTCATGCAACCAACCTAGAAACTGGAGCCTCTTGTGCAATGAAGGAGGTCAGTTTAATTCCTGATGATCCTAAATCTGCTGAGTGCATGAAACAACTTGACCAGGAAATCAAAATTCTTCACCAACTAAACCACCCCAACATTGTGCAGTATTATGGAAGTGAAATAGTCGGCAATCATTTGTACATATATATGGAGTATGTCCATCCAGGATCAATCAGTAAATTTATGCGTGAGCATTGTGGAGCTATGACAGAATCTGTGGTTCGCAATTTTACAAGGCATATTCTCTCTGGATTAGCGTATTTACACAGTAACAAAACCATCCACAGAGATATCAAAGGTGCAAACTTGTTGGTCAATGAATCAGGCATTGTGAAACTTGCAGATTTTGGGCTGGCAAAAATTCTGATGGGGAATTCATATGATCTTTCTTTGAAGGGTAGTCCTTATTGGATGGCTCCAGAGGTCGTGAAAGGTGCCATAAAGAACGAATCTAATCCTGATATTGTCATGGGAATTGACATATGGAGCTTAGGGTGCACCATTATAGAGATGTTAACAGGAAGACCTCCTTGGAGCGAAGTTGAAGGGCCTTCAGCCATGTTCAAGGTACTGCAAGAGTCCCCGCCCATACCTGAAACTTTATCATCAGTGGGAAAGGATTTCCTCCAAAAATGCTTCCGAAGGGACCCTGCATATCGACCATCTTCATCAACGCTTCTTAAGCATGCCTTTGTGCAGAATCTGCATGATCAAGATGTTTTAGTCCATCCACAATCCTATCCTAGAGGAGACCTTGGACCAGGAGGTAATTCAGCTGGTCCTAGAGACACTACCACCAATAGAAGTTGCATAAAACAAGCCTCCATTAGCTCACGGTGTTTCAACAAAATTCAGAAACTAGCGGGCGATACTTCCGAACAAAGCAATGCCAAGAACTCTAATCATATTATACCTTGTAGTCACTCTCATGCACCAGAAGTGAGCATTCTTCAATCTTCATTGAAACCTGGTACCCTCAATTACATGTCTGCTGAAAATTCCAGAAACATTTCCACCATGATGAGAACGATCACAAACTTCTGA 2052 0.4508 MTLSPNSLSAGPHQHAPPRRLTRQRKLHHLTDHDIGFFSFHSANSSSSFSLSPEPRSHAASDHRSFSSLPQPLPLPVAPSTRRAWSVGPGSSHPPLSPPLEHRSFSSSGKALPHDVVTRTKPTLHLDSTLANSKCNLREHIPAANFVTDHSSLINRRAVSHGYDSEGNPHLHLGVCAKPKSAPTSVVTSPDTSPYRSNNRDFFDPTFTFSLEVNDKLRMLSAKSVHSLDHSPIQCPLSLTRHFNPKIEEGSQSNKFLSKVSPENNHVDAHPLPLPPRASPPAQLSVLHQSSTIYHATESIPSVKGQWQKGKLIGRGTFGSVFHATNLETGASCAMKEVSLIPDDPKSAECMKQLDQEIKILHQLNHPNIVQYYGSEIVGNHLYIYMEYVHPGSISKFMREHCGAMTESVVRNFTRHILSGLAYLHSNKTIHRDIKGANLLVNESGIVKLADFGLAKILMGNSYDLSLKGSPYWMAPEVVKGAIKNESNPDIVMGIDIWSLGCTIIEMLTGRPPWSEVEGPSAMFKVLQESPPIPETLSSVGKDFLQKCFRRDPAYRPSSSTLLKHAFVQNLHDQDVLVHPQSYPRGDLGPGGNSAGPRDTTTNRSCIKQASISSRCFNKIQKLAGDTSEQSNAKNSNHIIPCSHSHAPEVSILQSSLKPGTLNYMSAENSRNISTMMRTITNF* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0196 683 SUPERFAMILY Protein kinase-like (PK-like) 288 584 IPR011009 -
Pvu1g0196 683 Gene3D Transferase(Phosphotransferase) domain 1 304 584 - -
Pvu1g0196 683 MobiDBLite consensus disorder prediction 48 110 - -
Pvu1g0196 683 ProSitePatterns Protein kinases ATP-binding region signature. 313 336 IPR017441 GO:0005524
Pvu1g0196 683 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 15 677 - -
Pvu1g0196 683 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 15 677 - -
Pvu1g0196 683 MobiDBLite consensus disorder prediction 583 602 - -
Pvu1g0196 683 SMART serkin_6 307 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0196 683 ProSiteProfiles Protein kinase domain profile. 307 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0196 683 Pfam Protein kinase domain 308 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0196 Pvu-Chr1 1635308 1640727 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pvu1g0196 Pkinase 9.1e-66 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0196 1 1635308 1640727 Pvu1g0196 1 1635308 1640727 ECH
Pvu1g0196 1 1635308 1640727 Pvu9g0644 9 10921149 10927462 PCT