Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0194 ATGGCCATCAACGACTTCTTCGCCGGCGAGATTGCGACGGAGCTTCTGAAAATGCTCATCAGCATCTCTCGGAAGTCGCTCCTCTGCCGCGCCAGCGCCGACCAGCTCATCACCTACATACACGAGCTCCTCCCCACCATCGAGGAGATTAAGTACTCTGGCGTCGAGCTCCCCGCCCTGCGCCAGTCCCAGCTCCACCGTCTATCGGAGCTTCTCCGGTCCGGCGTGGAGCTCTCCCACAAGGTCCTGGCCTCCAGCCGCTGGAACGTCTACCGCAACCTCCACCTCGCCAAGAAGATGGACAAGCTCGAGAAGACCGTCTCAAAATTCCTCCTCGGCCCCATGCAGGCCCACATCCTCGCCGACGTCCACCACACGCGCTTCGAGATGGCCGAGCGCTTCGACCGCGTTGACAACTCCGTCCGCCACCTCGAACAGTACTTCGAGAACATTAAGATTGGTGTCGGCGGCGGCGGCTGGGTTGAGGAGGCTGTGAGGAGTGTGAATGAGGATGTTGTTGATGGCAACGCCGCTGTGGGGTTGGGGTTCGGGAAGATTAAGGTAAGGGAGATGGTTGTCGGGAGGGAGGATCTCTGGGTTGTCGGGATTTCTGGGATTGGCGGCTCCGGGAAGACCACTCTTGCTAGAGAGGTCTGCAAAGATGAACAAGTTAAATGTTATTTCAGGGAGAGGATTTTGTTCCTGACAGTGTCGCAGTCTCCAAACGTGGAGCAACTAAGGACAAAGATTTGGGGGTATATTATGGGCAACGAGAGATTGGATGCGAACTATGTGGTTCCACAGTTAATGCCGCAGTTTGAGAGCAAAAGCGAAGCAGCTCGAACTCTGATTGTTCTGGATGATGTGTGGACACTCTCTGTGGTGGAGCAGCTTGTGTGTAGAATACCTGGTTGCAAGTTTCTTGTGGTGTCCAGAACTAAATTCCAAACGGTGTTGTTGAGTTATGAAGTGGAATTGCTGAGTGAAGAGGATGCCCTGTCTTTGTTCTGTCACCATGCTTTTGGCCAGAAATCAATCCCTTTAGCTGCTAATCAGAATTTGGTGAATCAGGTTGTCACTGAATGTGGAAGGCTTCCTTTGGCTCTTAAGGTGATTGGAGCTTCATTGCGAGATCAAACTGAGATGTTTTGGTTAAGTGTTAAAAACAGGTTATCTCAAGGCCAAAGTATTGGGGAATCCCACGAAATCAATCTGATTGAAAGAATGGCAATCAGTATCAATTACCTTCCAGAAAAAGTTAAGGAATGCTTCTTGGACCTGTGTTCATTTCCTGAGGATAAACAAATCCCTTTGGATGCTCTCATCAATATGTGGGTGGAAATTCATGATATTCCTGAAACAGAAGCTTATGCCATTGTTGTTGAGCTTTCCAACAAAAATCTTATCACCTTAATGAAAGAGCCTCGAGCTGGAGGCATGTATAGCAGTTGCTTTGAGATCTATGTTACTCAACATGATATACTCAGAAACCTTGCCCTCAATTTGAGCAACCGTGCTACAATTAATGATCGCCGGCGATTAGTAATGCCGAAAAGAGAAAATGGAATTCCTAAAGAGTGGTTGAGATACAAGCACAAGCCATTTGAGGCTCAAATTGTTTCAATTCATACAGGTGAAATGAAAGAGGTGGACTGGTGTAATCTGGAATTTCCAAAGGCAGAAGTTTTGATCATTAACCTCACATCCTCTGAGTACTTCTTACCTCACTTCATCAATAGAATGCCAAATTTGAGGGCATTGATAATAATAAACTACAGTGCAAAATATGCTTGCCTTCACAACATTTCAGTTTTCAAGAACTTGTCCAACTTGAGGAGCCTCTGGCTTGAAAAAGTTTCCACCCCAGAGCTATCAGGCACTGTCTTGGAAAACTTGGGAAAATTATTTGTTGTTCTCTGCAAGATTAACAACAGTTTGGATGAAAAAGAGGTAGCCAAAGTCTTCCCAAACCTCTTTGACCTCACTCTTGATCATTGTGATGATCTAACCCAATTGCCCTCAAGCATTTGTGGAATGAACTCACTTCAAAACTTGAGTCTCACCAACTGCCACAATTTGACTCAATTACCTCTTGAACTAGGAAAGCTAAAATCTCTAGAGATCCTTCGTTTATATGCTTGCCCTGATTTGAAAACACTTCCTAATAGCATATGTGGCATGAAGAGATTGAAGTACATTGACATTTCTCAATGTGTGAACCTCACATGCTTCCCTGAAGAGATTGGTGGACTAGTAAGCTTGGAGAAGATTGACATGAGGGAATGTTCCATGATCAGAAATATACCAAAGTCTGTGTTGTCACTGCAGTCTCTGCAACTTGTGATTTGTGATGAAGAGGTATCTGGGATTTGGAAAGAGGTTGAGAAGGCCAAGCCTAATGTGCATATTCAAGTATCAGAACCCTACTTTGACTTGAACTGGCTTAAAGAGTGA 2454 0.4593 MAINDFFAGEIATELLKMLISISRKSLLCRASADQLITYIHELLPTIEEIKYSGVELPALRQSQLHRLSELLRSGVELSHKVLASSRWNVYRNLHLAKKMDKLEKTVSKFLLGPMQAHILADVHHTRFEMAERFDRVDNSVRHLEQYFENIKIGVGGGGWVEEAVRSVNEDVVDGNAAVGLGFGKIKVREMVVGREDLWVVGISGIGGSGKTTLAREVCKDEQVKCYFRERILFLTVSQSPNVEQLRTKIWGYIMGNERLDANYVVPQLMPQFESKSEAARTLIVLDDVWTLSVVEQLVCRIPGCKFLVVSRTKFQTVLLSYEVELLSEEDALSLFCHHAFGQKSIPLAANQNLVNQVVTECGRLPLALKVIGASLRDQTEMFWLSVKNRLSQGQSIGESHEINLIERMAISINYLPEKVKECFLDLCSFPEDKQIPLDALINMWVEIHDIPETEAYAIVVELSNKNLITLMKEPRAGGMYSSCFEIYVTQHDILRNLALNLSNRATINDRRRLVMPKRENGIPKEWLRYKHKPFEAQIVSIHTGEMKEVDWCNLEFPKAEVLIINLTSSEYFLPHFINRMPNLRALIIINYSAKYACLHNISVFKNLSNLRSLWLEKVSTPELSGTVLENLGKLFVVLCKINNSLDEKEVAKVFPNLFDLTLDHCDDLTQLPSSICGMNSLQNLSLTNCHNLTQLPLELGKLKSLEILRLYACPDLKTLPNSICGMKRLKYIDISQCVNLTCFPEEIGGLVSLEKIDMRECSMIRNIPKSVLSLQSLQLVICDEEVSGIWKEVEKAKPNVHIQVSEPYFDLNWLKE* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0194 817 Gene3D - 184 319 IPR027417 -
Pvu1g0194 817 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 135 IPR008808 -
Pvu1g0194 817 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 427 IPR027417 -
Pvu1g0194 817 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 814 IPR044974 GO:0006952
Pvu1g0194 817 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 6 814 - -
Pvu1g0194 817 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Pvu1g0194 817 Gene3D - 409 498 IPR036388 -
Pvu1g0194 817 Gene3D - 326 408 IPR042197 -
Pvu1g0194 817 SUPERFAMILY RNI-like 566 779 - -
Pvu1g0194 817 PRINTS Disease resistance protein signature 200 215 - -
Pvu1g0194 817 PRINTS Disease resistance protein signature 276 290 - -
Pvu1g0194 817 PRINTS Disease resistance protein signature 362 376 - -
Pvu1g0194 817 PRINTS Disease resistance protein signature 725 741 - -
Pvu1g0194 817 Pfam NB-ARC domain 197 405 IPR002182 GO:0043531
Pvu1g0194 817 Gene3D Ribonuclease Inhibitor 525 801 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0194 Pvu-Chr1 1620028 1624136 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0194 1 1620028 1624136 Pvu1g0194 1 1620028 1624136 ECH