Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0193 ATGGCTCTCACGGAACTCTTCACCGGAGAGATAGCCTCCGATCTCTGGAAAATGCTCATCACAATTTCCCGAAAGGCCCTGCGCTGCAAATCGAGCGCCGAGCAACTCATCACCTACGTGCGCGAGATTCTTCCCACCATCGAGGAAGTCAAGTACTCCGGCGTGGAGCTTCCGGCGCCGAGGCAGTCGCAGCTGGACCGCCTCTCGGAGATTCTGCGCTCCGGCGTGGAGCTTTCGCACCAGGCGCTCTCCTCCAGCCGCTGGAACGTGTACCGGAACTTCCAGCTGGCGAAGAAGATGGAGAAGCTGGAGAAGCATGTGACGAGGTTTCTGCAGATTCCGATGCAGGCGCACATACTCGCTGATGTGCATCACGTGCGGTTCGAGATGGCGGAGCGGTTCGACCGGGTGGAGGCGTCGAACCGGCGCATGGAGCGGTTTCTCGGCGAGATGAAGATCGGAGTGAACGGGGGTGGGTGGGTGGAGGAGGCTGTGAAGAGCATGCAGGAAGATGAGACGTGGGTGGAAGGGTGTAACGGGAATAACGGTTTCGGGGTTGGGTTGGACTTCGGGAAGAACAAGGTTATGGAGATGGTTTTCTCCAGGAATGATGCTGATTGGATTGTCGGGATTTGTGGGATTGGTGGCTCCGGGAAAACCACCCTCGCCAGAGAGCTTCTCAGAGATGACCAAGTCCGATGTTATTTCAAGGACAGGATTTTGTTTTTGGCCGTGTCACAGTCTCCGAATGTGGAGCAGCTGAGAGCGAGGATCTGGGCACACATCATGGGCAACCAAGGCTTCAATGGAGATTACGTGGTTCCACAAAGGATGCCACAGTTTGAGTGCAAAGGGGAAGCTCAAGTTCTTGTTGTTCTTGATGATGTGTGGTCACTCTCCGTGCTAGAGCAGCTTGTGTGGAAAATTCCTGGCTGCAAATACCTTGTGGTGTCTCGATTCAGATTCCCAACATTTTTTAGTGCCACTTATCATGTGGAATTGCTGGGTGAAGAGGATGCCCTCTCTTTGTTTTGCCACCATGCTTTTGGACAGAAGTCAATTCCTTTGGGTGCTAATGTGAGTTTGGTGAAGCAGGTTGTGGCTGAGTGTGGAAAGCTTCCTCTGGCACTGAAGGTGATTGGAGCTTCTTTGCGTGACCAGAACGAAATGTTTTGGTTGAGTGTTAAGAGTAATCTGTCTCAGGGTCACAGCATTGGTGAGTCCTATGAAATCAATCTGATTGATAGAATGGCAATTAGTACTGAATACCTGCCAGAAAAGATCAAGGAGTGCTTCTTGGACCTGTGCGCTTTTCCTGAGGATAGAAAGATCCCTCTAGAAATTCTGATCAATATGTGGGTTGAAATCCATGACATTCGCGAGGCAGAAGGATATGCCATTGTGGTTGAGCTTTCCAACAAGAACCTTCTAACCTTAGTGAAAGAAGCACGTGCCGGGGGCATGTATAGCAGTTCCTTTGAGATTTCTGTGACTCAACATGATACACTGAGAGACCTTGCTCTTATTTTGAGCAAGCGTGGGAGCATTCAAGAACACCGAAGGTTAGTTATGGCTCAACGAGAAGAAAATGGACTACTCCCCAAAGAATGGTCAAGATACCAGAACCGACCCTTTGAAGCTCAGATTGTTTCAATCAACACAGGTGAAATGACAGAAATGGATTGGTATGAACTGGATTTTCCCAAGGCTGAAGTGTTGATTATCAACTTCACGTCCAGTGATTACTTTTTACCTCCCTTCATCCGCAAGATGCCAAATTTGAGGGCATTGATAATAATAAACTACAGTACCTCATATGCCCGCCTTCACAATGTTTCAGTTCTTAGGAATTTGACCAACTTGAGGAGTCTCTGGCTTGAAAAGGTTTCCACCCCTCAGTTGTCAGGCACTGTCCTGCAAAACTTGGGCAAACTATTCATAGTCCTCTGCCAGATTAACAATAGTTTGGATGGGAAACAGTTCCCTAACCTCTCTGAGCTCACTCTTGATCACTGTGCTGATCTAACCTACTTGCCCTCAAGCATTTGTGGAATAAAGTCACTCCGAAACATGAGCCTCACAGACTGCCACAATTTATCTCAACTACCTGTTGAATTTGGCAAACTAAAATCTCTAGAGATCCTCCGTTTATATGCTTGTCCATACCTAGAAACACTTCCTCCTACCATGTGTGACATGAAGAAATTGAAGTATATTGACATTTCTCAGTGTACTAACCTCACCTGCTTCCCTAATGACATTGGTAGATTAGCAAGTTTAGAGAAGATTGACATGAGAGAATGCCCCATGATTAGGCATTTACCAAAGTCAGCAGTGTCACTACAATCTCTGCAGCTTGTGATTTGTGATGAGGAGTTGTATGGTACATGGAGAGATGTTGTTGAGATGGCCAAGTCAAATGTCCTTATTCAAGTACGAGAACCACAATTTGATCTGTGCTGGCTTCAAGAATGA 2475 0.4764 MALTELFTGEIASDLWKMLITISRKALRCKSSAEQLITYVREILPTIEEVKYSGVELPAPRQSQLDRLSEILRSGVELSHQALSSSRWNVYRNFQLAKKMEKLEKHVTRFLQIPMQAHILADVHHVRFEMAERFDRVEASNRRMERFLGEMKIGVNGGGWVEEAVKSMQEDETWVEGCNGNNGFGVGLDFGKNKVMEMVFSRNDADWIVGICGIGGSGKTTLARELLRDDQVRCYFKDRILFLAVSQSPNVEQLRARIWAHIMGNQGFNGDYVVPQRMPQFECKGEAQVLVVLDDVWSLSVLEQLVWKIPGCKYLVVSRFRFPTFFSATYHVELLGEEDALSLFCHHAFGQKSIPLGANVSLVKQVVAECGKLPLALKVIGASLRDQNEMFWLSVKSNLSQGHSIGESYEINLIDRMAISTEYLPEKIKECFLDLCAFPEDRKIPLEILINMWVEIHDIREAEGYAIVVELSNKNLLTLVKEARAGGMYSSSFEISVTQHDTLRDLALILSKRGSIQEHRRLVMAQREENGLLPKEWSRYQNRPFEAQIVSINTGEMTEMDWYELDFPKAEVLIINFTSSDYFLPPFIRKMPNLRALIIINYSTSYARLHNVSVLRNLTNLRSLWLEKVSTPQLSGTVLQNLGKLFIVLCQINNSLDGKQFPNLSELTLDHCADLTYLPSSICGIKSLRNMSLTDCHNLSQLPVEFGKLKSLEILRLYACPYLETLPPTMCDMKKLKYIDISQCTNLTCFPNDIGRLASLEKIDMRECPMIRHLPKSAVSLQSLQLVICDEELYGTWRDVVEMAKSNVLIQVREPQFDLCWLQE* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0193 824 Gene3D - 179 322 IPR027417 -
Pvu1g0193 824 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 3 821 - -
Pvu1g0193 824 Gene3D - 415 506 IPR036388 -
Pvu1g0193 824 PRINTS Disease resistance protein signature 208 223 - -
Pvu1g0193 824 PRINTS Disease resistance protein signature 283 297 - -
Pvu1g0193 824 PRINTS Disease resistance protein signature 370 384 - -
Pvu1g0193 824 PRINTS Disease resistance protein signature 731 747 - -
Pvu1g0193 824 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Pvu1g0193 824 SUPERFAMILY RNI-like 567 787 - -
Pvu1g0193 824 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 821 IPR044974 GO:0006952
Pvu1g0193 824 Pfam NB-ARC domain 192 414 IPR002182 GO:0043531
Pvu1g0193 824 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 133 IPR008808 -
Pvu1g0193 824 Gene3D - 334 413 IPR042197 -
Pvu1g0193 824 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 435 IPR027417 -
Pvu1g0193 824 Gene3D Ribonuclease Inhibitor 526 807 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0193 Pvu-Chr1 1613891 1618161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0193 606 810 Receptor kinase-like Gene Family AT3G05660 26.636 4.36e-09 58.2