Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0179 ATGGAGAGTCCCTTGCTAGAACACAATGAGAACTCAGACATTGGTGAGGAGAAGACAGTGAAGAGTGCTGTTAAGAATTTTGGTTTTGAGTCAAAGAAGCTGTGGAGATTAGCAGGCCCTGCTATTCTCACCTCTGTGTTTCAGTACTCGCTTGGTGCACTCACTCAAACTTTTGCAGGCCAAGTTGGTGATCTTGATCTTGCAGCAGTTTCTGTAGAAAACTCTGTTGTTGCAGGTCTTGCCTTTGGAGTCATGTTGGGAATGGGAAGTGCCTTGGAGACTCTGTGTGGGCAAGCTTTTGGTGCAGGGCAGATAAGGATGTTAGGAGTGTACATGCAGAGATCATGGGTCATCTTGTTCATCACTGCACTTCTTATGTTACCTATTTATGTTTGCTCACCCCCAATTCTAGTGCTGCTTGGACAAACATCTCAAATCTCAACTGCTGCAGGAAAATTTGCTGTGTGGATGATACCCCAGTTGTTTGCATATGCTCTAAACTTTCCAATCCAAAAGTTCTTGCAGGCACAGGGGAAAGTCCTGGTGATGTTATGGGTATCAGGAGGTGTGTTGGTGCTGCACACATTTTTTAGTTGGCTTCTTATACTGAAGCTGGAGTGGGGTCTAATTGGAGCAGCAATTACTCTCAACACATCATGGTGGTTGATTGTGATTGCACAATTGTTGTACATTTTCATCACAAAGTCAGATGGAGCATGGAGTGGTTTCACATGGCTAGCATTTGTGGACTTGTTTGGTTTTGTAAAGCTTTCTCTCGCTTCAGCTGTTATGTTATGCTTGGAGTTTTGGTATTTGATGATACTGGTCGTCATAACAGGGCGTTTAGAAAATCCTCTCATACCTGTTGATGCCATATCTATCTGTATGAACATAAATGGATGGGATGCAATGATTGCAATTGGGTTCAATGCTGCTATAAGTGTGAGAGTATCAAATGAACTTGGTGCTGGTGATTTCAAGGCTGCAAGGTTTTCAGTGTGGGTGGTTTCCATCACATCAGTGGCCATAGGTGTTGTGGCCATGATCGTAGTGCTGTCAACAAAAGATTACTTTCCCTACTTGTTTACCTCCACCACTGCAGTTGCCATTGAAACAACTAAGCTTGCTGGTTTGCTCGGTATCACTGTGCTTCTAAACAGCCTTCAACCAGTCCTATCTGGTGTTGCTGTTGGAGCTGGTTGGCAATCTCTAGTAGCATACATCAACATTGGATGCTACTATGTATTTGGATTACCAGCAGGGATAGTCTTGGGATTTGTACTTAATTTTGGAGTTGAGGGTATTTGGTCAGGGATGATTGGAGGCATAGTTTTGCAGACCACAATCCTTATAATAGTCACTTCATTAACCAATTGGAAAAAAGAGGCCGAAGAAGCAGGAAGTCGTGTGAGAAAGTGGGGAGGATCAGTTGCACATGATCAATGA 1446 0.4343 MESPLLEHNENSDIGEEKTVKSAVKNFGFESKKLWRLAGPAILTSVFQYSLGALTQTFAGQVGDLDLAAVSVENSVVAGLAFGVMLGMGSALETLCGQAFGAGQIRMLGVYMQRSWVILFITALLMLPIYVCSPPILVLLGQTSQISTAAGKFAVWMIPQLFAYALNFPIQKFLQAQGKVLVMLWVSGGVLVLHTFFSWLLILKLEWGLIGAAITLNTSWWLIVIAQLLYIFITKSDGAWSGFTWLAFVDLFGFVKLSLASAVMLCLEFWYLMILVVITGRLENPLIPVDAISICMNINGWDAMIAIGFNAAISVRVSNELGAGDFKAARFSVWVVSITSVAIGVVAMIVVLSTKDYFPYLFTSTTAVAIETTKLAGLLGITVLLNSLQPVLSGVAVGAGWQSLVAYINIGCYYVFGLPAGIVLGFVLNFGVEGIWSGMIGGIVLQTTILIIVTSLTNWKKEAEEAGSRVRKWGGSVAHDQ* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0179 481 PANTHER PROTEIN DETOXIFICATION 33 16 467 - -
Pvu1g0179 481 TIGRFAM matE: MATE efflux family protein 40 436 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu1g0179 481 Pfam MatE 40 200 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu1g0179 481 Pfam MatE 261 421 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu1g0179 481 CDD MATE_eukaryotic 30 465 IPR045069 GO:0042910|GO:1990961
Pvu1g0179 481 PANTHER MULTIDRUG RESISTANCE PROTEIN 16 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0179 Pvu-Chr1 1455788 1462715 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0179 1 1455788 1462715 Pvu1g0179 1 1455788 1462715 ECH