Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0175 ATGAATCATGTTGCATTTCTCTTCACAATAACAACCTTTTTTGTTCTTTGTTTTAACAGCAAAGCTCAGCAAAATTACTCTGGGAATTCAATACTCAGCTGCAAGAATGATGACAAAATGGGGCCCTCACCTTCATTCCTTTACACCTGCAATGGCCTCAACAAAACCTGCATGGCCTTCCTAATCTTCAAATCCAGACACCCTTTTGATTCCATACTCACAATTGCCAACCTCACATCATCAAACCCAGAAGAGCTTGCAAGAATCAATGATGCATCTGTGCTCACAGTGTTCCCAACTGGGAAAGAAATCATTGTGCCTCTGAACTGTTCTTGTCTCACTAGGGACTATTACCAAGCTGAAACTGAATATGTATTGGGACCATCCCCAACATATTTCACTGTGGCAAATAACACTTTTCAGGGTTTGACCACTTGTGATTCGCTTATGCGTGCTAATCCATATGGGGAACTTGATCTGCTTCCTGGCATGGAGTTGCACGTGCCACTCAGATGTGCTTGTCCAACAATGCATCAGGTAAAAAACGGCAGCAAGTATTTGCTTACACACTCAGTGAACTGGGGTGATAACATCACAAATATTGCTACAAGATTCAATGTAGCAGCAGGTAGTGTGGTTGATGCCAATGGTTTTAGCACACCAACACAATCTCTTTTTCCCTTCACAACTGTTCTGATTCCTCTGCCAAGTGAACCTCTGAGTTCAATGACAAAAATTGTTAGTGATCCACCAAATATGTCACCTCCTCTTGTTTGCAGCTCCATAAAGTGCAACTCAAAGAGAAAATTCCACACTGTTATTGCCACCACTGGGGGTTCCATGGTGCTTCTGTGTGCTGTCCTTTATGGGGTTTTTCTGTTCAGAAAGAGATCTGCAAGGTTCGTTAAGAGAGGTGAAGAAGGTGAGAAAGCAAAGAAGTTATCTTCAGAAAATATCCGTGGTAAGATAGCAATCATTGAGCATCACTCCAACGTTTATGACTTTGAGGAAATAAAGAAGGCCACAGATAATTTTAGTTCAAAGCATGGAATTAAAGGTTCTGTGTTTGGTGGGGTGTTTGGTAATGACAAGAACATGTTGGCTGTTAAAAGAATGAGAGGAGATGCATCCAAGGAAGTGAATTTGCTGAAAAGGGTCAATCATTTCAACCTGATAAAGCTGCAAGGTTACTGTGAAACCGATGCTTGTTCTTATCTTGTTTATGAGTATATGGAAAATGGCTCTTTGAGAGAATGGCTAAGCGCAAACAGGACCACCCAGCACCAGATTTTGGCAAAGAGGATTCTGATTTCTCTGGATATTGCCAATGGTCTTCAGTATCTTCACAACTTCACGGAACCTTCCTATGTGCACATGAACATAAACAGTGGAAACATTCTTCTGAACAAAGACCTAAGAGCCAAGATAGCAAATTTCGCTTTTGCTGAGGAATCAGAAAGGAAAATAACTTCAAGTTGTGCCTTGTCACGTGTGGAGAGGGGTTATATGGCTCCAGAGTATCTGGAGGCAGGGATGGTCACTACCAAAATGGATGTTTATGCCTTTGGAGTGGTGTTGTTGGAATTGGTCACAGGTAAAGATTTTGTTACCATACAAGAAGAGAGAAAAGCAATGCTTCATGTAGTCATGGTAAACCTCATTGCTAAAGAGAATGAAGAAGAGAAGGTGAGTTTGTTCATTGATCCTAGTTTCACTGGAAACAATGAGAAAGTGTGTGCTCTCCAGCTAGTTAAATTAGGTCTAGCCTGCTTGGTTGAAGAACCAGAAGAGAGGCCAACCATGGTAGAGGTAGTTTCTAGCTTATTGAAAATATATGTAAGTTATATGGACCAAATAATGCCACTTAGCAGCAGCAATAGTCTCAGCATGGAGAGGTGA 1899 0.4134 MNHVAFLFTITTFFVLCFNSKAQQNYSGNSILSCKNDDKMGPSPSFLYTCNGLNKTCMAFLIFKSRHPFDSILTIANLTSSNPEELARINDASVLTVFPTGKEIIVPLNCSCLTRDYYQAETEYVLGPSPTYFTVANNTFQGLTTCDSLMRANPYGELDLLPGMELHVPLRCACPTMHQVKNGSKYLLTHSVNWGDNITNIATRFNVAAGSVVDANGFSTPTQSLFPFTTVLIPLPSEPLSSMTKIVSDPPNMSPPLVCSSIKCNSKRKFHTVIATTGGSMVLLCAVLYGVFLFRKRSARFVKRGEEGEKAKKLSSENIRGKIAIIEHHSNVYDFEEIKKATDNFSSKHGIKGSVFGGVFGNDKNMLAVKRMRGDASKEVNLLKRVNHFNLIKLQGYCETDACSYLVYEYMENGSLREWLSANRTTQHQILAKRILISLDIANGLQYLHNFTEPSYVHMNINSGNILLNKDLRAKIANFAFAEESERKITSSCALSRVERGYMAPEYLEAGMVTTKMDVYAFGVVLLELVTGKDFVTIQEERKAMLHVVMVNLIAKENEEEKVSLFIDPSFTGNNEKVCALQLVKLGLACLVEEPEERPTMVEVVSSLLKIYVSYMDQIMPLSSSNSLSMER* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0175 632 Gene3D Transferase(Phosphotransferase) domain 1 411 623 - -
Pvu1g0175 632 ProSiteProfiles Protein kinase domain profile. 345 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0175 632 Pfam LysM domain 192 234 IPR018392 -
Pvu1g0175 632 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 8 619 - -
Pvu1g0175 632 Gene3D LysM domain 176 245 IPR036779 -
Pvu1g0175 632 ProSiteProfiles LysM domain profile. 188 233 IPR018392 -
Pvu1g0175 632 Gene3D Phosphorylase Kinase; domain 1 306 410 - -
Pvu1g0175 632 SUPERFAMILY Protein kinase-like (PK-like) 335 623 IPR011009 -
Pvu1g0175 632 Pfam Protein tyrosine and serine/threonine kinase 372 608 IPR001245 GO:0004672|GO:0006468
Pvu1g0175 632 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 8 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0175 Pvu-Chr1 1426937 1428927 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pvu1g0175 PK_Tyr_Ser-Thr 1.7e-35 CL0016