Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0166 ATGGCCTCCGACGGAGCTACTTCGGCTGCGGCTGCGGCGGCGGCGGCGAGTCGGAGAAAGCCGTCGTGGAGAGAGAGAGAGAATAACCGAAGGAGAGAACGAAGGCGAAGAGCGATCGCGGCGAAAATATACACTGGACTTCGAGCTCAGGGGAACTATAACTTGCCGAAGCACTGCGACAACAACGAAGTTCTCAAAGCGCTTTGCGCAGAAGCTGGTTGGTGTGTCGAAGAAGATGGAACCACATATCGCAAGGGTTGCAAGCCACCTCTGGCCAATGGTGCAGGGAGCTCGATGAGAAACATCCCCTTTTGTTCTTCACAAAACCAAAGTCCTTTTTCTTCGTCGTATCCCAGTCCAATTCCTTCATACCAAGTGAGTCCTTCTTCATCCTCTTTCCCAAGCCCGTTTCGGTTAGATGTGGATAAGGACAGTGTATCAAACCTCATTCCATACATTCGCAATGCCTCCCTGTCTCTTCCTCCTCTGAGGATATCAAACAGTGCCCCTGTGACGCCGCCTCTGTCATCACCCACGTCAAGAAATCCGAAACCAATTCCTACATGGGAGTCTATTGCAAAAGAATCCATGGCGTCCTTCAATTACCCTCTCTTTGCAGCTTCTGCTCCTGCCAGCCCCACGCACCGTCACCTTTACACCCCGGCAACTATTCCAGAATGTGACGAGTCTGATACTTCCACCTGTGAGTCTAGCCAGTGGATGAAATTCCAAGCATTTGCCCCTTCTGCATCTACGTTGCCAACTTCTCCTACCTTCAATCTTGTTAAACCTTTGGTTCCACATATTGTGCCTGATAACTCAATCCAAGAGATGAGGACGAGTTCAGAAGAGATTGGAGTGCAGGTAATGCCTTGGGTTGGGGAAAAAATTCATGAAGTGGCATTGGATGATTTGGAACTCACACTTGGAAGTGGGAAGGTGCGGAGTTAA 951 0.5005 MASDGATSAAAAAAAASRRKPSWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWCVEEDGTTYRKGCKPPLANGAGSSMRNIPFCSSQNQSPFSSSYPSPIPSYQVSPSSSSFPSPFRLDVDKDSVSNLIPYIRNASLSLPPLRISNSAPVTPPLSSPTSRNPKPIPTWESIAKESMASFNYPLFAASAPASPTHRHLYTPATIPECDESDTSTCESSQWMKFQAFAPSASTLPTSPTFNLVKPLVPHIVPDNSIQEMRTSSEEIGVQVMPWVGEKIHEVALDDLELTLGSGKVRS* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0166 316 MobiDBLite consensus disorder prediction 19 34 - -
Pvu1g0166 316 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 315 IPR033264 GO:0003700|GO:0006351|GO:0009742
Pvu1g0166 316 Pfam BES1/BZR1 plant transcription factor, N-terminal 17 156 IPR008540 -
Pvu1g0166 316 MobiDBLite consensus disorder prediction 1 34 - -
Pvu1g0166 316 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 1 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0166 Pvu-Chr1 1345080 1347266 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Pvu1g0166 BES1_N 9.5e-62 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0166 1 1345080 1347266 Pvu1g0166 1 1345080 1347266 ECH
Pvu1g0166 1 1345080 1347266 Pvu9g0582 9 10390335 10392402 PCT