Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0162 ATGAAACTGAAGTCTAAGAAAGGATGGAAGTCCATTGTGCCTCTTCATTTGAAAGGAAAATCATCAACCCGCTTTTCTTTATTTCGCAAAGTCAATTCAGCTGGCTATGGACCTGGCAGAACACCAGTTTATCTGAATGTGTATGACTTGACACCCATGAATGGTTATGTGTATTGGGCTGGTCTTGGTATCTATCACTCTGGTGTAGAAGTTCATGGTGTAGAATATGCATTTGGAGCTCATGACTACCCAACAAGTGGTGTTTTTGAGGTTGAACCTCGACAATGCCCTGGCTTCAATTTCAGGAAGTCAATACTCATAGGAACCACAACTCTGGATTCTACTCAGGTTAGGGAATTCATGGAACGCCAGTCAGCAAGCTACAACGGTGACACGTATCACTTAATTGTTAAGAATTGCAACCACTTCTGCAAAGACATATGTTACAAGTTGACGGGGAAATCCATTCCAACATGGGTAAATCGATTGGCCAGGCTAGGTTCAATCTGCAACTGTATTCTTCCTGAAGCACTAAGGATTTCTGGTGTGGGGCATGATCCTAATTATGAGCCTCATCAAGACAGTGAAAAGAGAAGGCTACGAAGTGGTTTCAATAGCTTGTCCTCAATCTCAACGCGTCAAAAGCACCTCTCCACTTCTTCACTGTTTCTACAGTCACCCTTAAGAGGGTGTTTGTCATCGTCATGGCCATCGTGGGAATTGAGAAAATCCATTAACCGATCCTTGAAAGAAAGATAA 759 0.4269 MKLKSKKGWKSIVPLHLKGKSSTRFSLFRKVNSAGYGPGRTPVYLNVYDLTPMNGYVYWAGLGIYHSGVEVHGVEYAFGAHDYPTSGVFEVEPRQCPGFNFRKSILIGTTTLDSTQVREFMERQSASYNGDTYHLIVKNCNHFCKDICYKLTGKSIPTWVNRLARLGSICNCILPEALRISGVGHDPNYEPHQDSEKRRLRSGFNSLSSISTRQKHLSTSSLFLQSPLRGCLSSSWPSWELRKSINRSLKER* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0162 252 PANTHER DESUMOYLATING ISOPEPTIDASE 2 252 IPR008580 GO:0008233
Pvu1g0162 252 PANTHER DESI-LIKE PROTEIN 2 252 - -
Pvu1g0162 252 SMART DUF862_2a 41 179 IPR008580 GO:0008233
Pvu1g0162 252 Pfam PPPDE putative peptidase domain 42 176 IPR008580 GO:0008233
Pvu1g0162 252 Gene3D PPPDE domains 37 182 IPR042266 -
Pvu1g0162 252 ProSiteProfiles PPPDE domain profile. 41 178 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0162 Pvu-Chr1 1318994 1322960 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0162 1 1318994 1322960 Pvu1g0162 1 1318994 1322960 ECH