Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0160 ATGCGTGCCGTCGTCAGTTTCTCGAAGTTTTCACTTCTGAAGCGACTATCTCACTGCTTAAATCCAACCCTCTCCTTCGCGTCGGAGACTTGGCCGGCGGCGACGGCGTTCATCGACGATGGATTCCCGTACCACGACATGCCGAAACGTCGGCGGAGAAACTCGGAGAGGAAGGCGTACGTGACGCCGATGAAGGTTCTGATCGAGAGGGCGAAGGCGGAGAGAGAAGCGCGAAAGGCGCAGCCATGCAGGGTTTTGGAGGAACCACCGGCGAACGGGTTGTTGGTGCCAGAACTGGTAGAGGTAGCCCATCGCGTGTATCAAGCTCGCGGCTCGCTCATCTTCGGACTGAGTCAGCTCGTTCGAGTCATTCCCGTTTTGCGCTGCCGGCTTTGTAATGAGGTCCACATTGGTTATGTTGGTCATGAAATTCGAACATGTACTGGACCAGACAGTTTTTCCCGGAATGCGACACATGTTTGGACAAGGGGAGGTGTTCGAGATGTGGTTTGCTTCCCTAAATGTTTTCATCTTTATGATCGTGTTGGTAGGCCAAGAGTTGGGCATGATGAAAGGTTCAGCATTCCTCGTATACCTGCCATTGTTGAACTCTGTATTCAAGCAGGTTTAGACCTTGAAAAATATCCTACTAAAAGAAGAACAAAGCCTGTATATTGTATTGAAGGAAGAATTGTAGATTTTGAATCAGTTGTGAAAGAGGGTGACACTGAAGGAAAATGTTCTTTTGGAAATGACAAACCTTCTATGAATTTATCCACTTCGCTGACCCAACCTTCAGAGAAGGTCCTGAATTTATTGGAGAACAATATAAGCCATCTGGATCAGTTAAGTGATGAAGAAAGAAAGAAGTTAAGGGATTTAAGTAATCATACACTGAACTCATGGATTGAGATGTCATCAGGTGCAAAGAAGATCATGGAGAAATATGCTGTGAATACTTGTGGCTACTGTCCTGAGATCCAGGTTGGTCCGAAAGGACATAAGTTGAGAATGTGCAAGGCTTCAAAGCATCAGTCTCGAAATGGTCTACATGCATGGCAAGAGGCAACATTAGATGATCTTGTAGATCCAAATTATGTCTGGCATGTGGAGGATCTGAATGAACCTGCTCTGAATAACAATCTTAAGAGATATTATGGGAAGGCTCCAGCTGTGGTGGAACTCTGTGTGCATGGTGGAGCTCCTGTTCCTGATCAATATAGGAGCATGATGAGATTAGACGTAGTTTCCCCTGATCGAGATGAAGTCGATCTTGTGGCTTAA 1284 0.4626 MRAVVSFSKFSLLKRLSHCLNPTLSFASETWPAATAFIDDGFPYHDMPKRRRRNSERKAYVTPMKVLIERAKAEREARKAQPCRVLEEPPANGLLVPELVEVAHRVYQARGSLIFGLSQLVRVIPVLRCRLCNEVHIGYVGHEIRTCTGPDSFSRNATHVWTRGGVRDVVCFPKCFHLYDRVGRPRVGHDERFSIPRIPAIVELCIQAGLDLEKYPTKRRTKPVYCIEGRIVDFESVVKEGDTEGKCSFGNDKPSMNLSTSLTQPSEKVLNLLENNISHLDQLSDEERKKLRDLSNHTLNSWIEMSSGAKKIMEKYAVNTCGYCPEIQVGPKGHKLRMCKASKHQSRNGLHAWQEATLDDLVDPNYVWHVEDLNEPALNNNLKRYYGKAPAVVELCVHGGAPVPDQYRSMMRLDVVSPDRDEVDLVA* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0160 427 ProSiteProfiles APO domain profile. 128 214 IPR023342 GO:0003723
Pvu1g0160 427 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 15 427 - -
Pvu1g0160 427 Coils Coil 270 290 - -
Pvu1g0160 427 ProSiteProfiles APO domain profile. 320 405 IPR023342 GO:0003723
Pvu1g0160 427 PANTHER APO PROTEIN 3, MITOCHONDRIAL 15 427 - -
Pvu1g0160 427 Pfam APO RNA-binding 290 409 IPR023342 GO:0003723
Pvu1g0160 427 Pfam APO RNA-binding 44 233 IPR023342 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0160 Pvu-Chr1 1306882 1309660 Dispersed