Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0153 ATGGCAACCTCTCTCGCATTTCTTCTTCAGTTTCTTCCTTTCTTTCTCATATTTAACCTTGCAAGTTCTGAATCGTTCATCGGCGTCAACTATGGACAAGTCGCCGACAACCTGCCGCCGCCTGCGGCGACGGCGAAGCTGCTCCAGTCGACGGCAATAGGAAAAGTCCGGCTGTACGGAACTGATCCGGCGATAATACAAGCGCTGGCGAACACGGGAATTGGAATTGTGATCGGCGCGGCGAACGGCGATATTCCGGGGCTGGCGTCGGACCCGAACTTCGCGAAAACGTGGGTGAACACCAACGTGGTGCCGTACTACCCAGCGAGCAACATCATCCTCGTGACTGTTGGCAACGAAGTGATAACCTCGAACGACACGGGCCTCGTGAACCAGATGCTGCCGGCGATCCAGAACGTGCAGGGCGCGCTGGAGGCGGCCTCTCTCGGCGGCAAGGTCAAGGTGTCGACGGTGCACTCGATGGCGGTTCTGAGGGACTCGGAGCCTCCCTCCGCCGGAAGGTTCCACCCTGAGTACAACACCGTTTTGCAGGGGCTGTTGTCGTTTAACAATGCCACGGGCTCGCCCTTCACCATCAACCCTTATCCCTACTTTGCCTACAGAAGCGACCCTGGCAGAGCCGATAACCTTGCTTTCTGCCTCTTTCAGCCTAACGCCGGCCGAGTTGACCCAAACACCAACTTGAAGTACATGAACATGTTCGATGCTCAGGTGGATGCGGTTCGTTCAGCGTTGGATTCTCTGGGGTTCAAGAATGTTGAGATTGTGGTGGCGGAGACAGGGTGGCCATACAAGGGAGACACCAGTGAAGCTGGTCCAAGTCTTGAGAATGCCAAGGCTTATAACGGTAATCTCATTGCACACCTTCGATCTATGGTTGGAACCCCATTGATGCCTGGAAAATCAGTGGACACATACCTTTTTGCTCTCTATGATGAGGACTTGAAGCCCGGAGATGCTTCTGAGAGAGCCTTTGGGCTTTTCAACCCTGATCAATCTATGATCTATGATGCTGGCCTCACCAAACAGCAGCAAACTAACAGCCCCGTGCCAGTATCTGCACCGACCACTCCGGATCTGTCAAAATCTCCCGTGACTCCAAAGCCAACCAAAACAAATAGTAGTGGAACATGGTGTGTGCCGAAAGCAGGAGTCTCAGATGCAGAGTTACAAGCAAATTTGGACTATGCTTGTGGGCAGGGGATTGATTGTGTCGCAATTCAACAAGGAGGGGCTTGTTTTGAACCTAACACTCTACTAAACCATGCTGCATATGCCATGAATCTACTGTATCAAACTGCTGGACGGAATCCATTGACTTGTGATTTCTCTCAAACAGCCATGTTATCAACGAATAATCCAAGTTACAAGAGTTGTCTTTATGCTGGTGGAAATGCCTAA 1422 0.519 MATSLAFLLQFLPFFLIFNLASSESFIGVNYGQVADNLPPPAATAKLLQSTAIGKVRLYGTDPAIIQALANTGIGIVIGAANGDIPGLASDPNFAKTWVNTNVVPYYPASNIILVTVGNEVITSNDTGLVNQMLPAIQNVQGALEAASLGGKVKVSTVHSMAVLRDSEPPSAGRFHPEYNTVLQGLLSFNNATGSPFTINPYPYFAYRSDPGRADNLAFCLFQPNAGRVDPNTNLKYMNMFDAQVDAVRSALDSLGFKNVEIVVAETGWPYKGDTSEAGPSLENAKAYNGNLIAHLRSMVGTPLMPGKSVDTYLFALYDEDLKPGDASERAFGLFNPDQSMIYDAGLTKQQQTNSPVPVSAPTTPDLSKSPVTPKPTKTNSSGTWCVPKAGVSDAELQANLDYACGQGIDCVAIQQGGACFEPNTLLNHAAYAMNLLYQTAGRNPLTCDFSQTAMLSTNNPSYKSCLYAGGNA* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0153 473 SMART X8_cls 384 468 IPR012946 -
Pvu1g0153 473 Gene3D Glycosidases 26 355 - -
Pvu1g0153 473 SUPERFAMILY (Trans)glycosidases 27 345 IPR017853 -
Pvu1g0153 473 Gene3D - 378 469 - -
Pvu1g0153 473 PANTHER GLYCOSYL HYDROLASE FAMILY 17 PROTEIN 14 459 - -
Pvu1g0153 473 MobiDBLite consensus disorder prediction 349 381 - -
Pvu1g0153 473 Pfam Glycosyl hydrolases family 17 27 344 IPR000490 GO:0004553|GO:0005975
Pvu1g0153 473 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 14 459 IPR044965 GO:0004553|GO:0005975
Pvu1g0153 473 Pfam X8 domain 384 455 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0153 Pvu-Chr1 1264657 1267924 Dispersed/Wgd