Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu1g0148 | ATGGGAATGGGGGCAATTGCAGAGAGTGTGGTTTCAGTGTTGTTGTTAATGTTTGGGTTAACAATGGGAATGGGTTTGAGTTCGAGACCGGAATGGGTCGCGTTAAGGGAGCTTCGATCGTCGTTGGGGATTAGGGCAAAGTATTGGCCCATAAAAGCAGAACCGTGCAGGAACTGGACCGGAGTTCAGTGCCGGAAAGGTCGAGTTGTGGGTTTAAACTTGTCCGGTTTGAGGAGAACCCGGTTGGGTAGCGTTAACCCAAGTTTTGAAGTGGGTTCTCTTGTGAATTTGACACTGTTAGAATCGTTTAATGCTTCTGGGTTTGTGCTTAATGGGTCTATTCCTGAGTGGTTGGGTGGGAGACTGAGGGTGTTGGATGTTCTTGACCTTAGGTTTTGTTCTATAACGGGTTGGATTCCTTATTCAATTGGGAAGTTGAGTGTGTTGAAGGTTTTGGTGCTTTCAGGGAATTTTCTCACTGGTAGAATGCCTTCAACGCTTGGGAACCTCACAAGGTTGTCTGTTCTTGATCTCTCTGCTAACTCTCTTTCAGGCTATGTGCCTGCTTCTGTGTCTAAACTTGGGAATCTCACAAGGCTTGATCTTTCTGGCAATTATTTTTCTGGGTCTGTTCCACCTGAACTGGGTGCACTTTCGAGTCTTCAAAAGTTGAACCTTTCTGGGAATTCTTTTACTGGGTCGATTCCCTCTCAACTGGGTAACCTTTTTGAGTTGGTTGAGGTTGATCTTAGTATGAATTTTCTGTCGGGTTCGTTTCCAGGTGATTTGTTTTTCTCTCGGCTCTTGGCCCTCGAGGTTCTCATTCTCAGAGGGAATTCGTTTGATGGCGTTCTTCATGATAATCTTAGGCTAACGCCCAGGTTGAGCTTTCTTGATGTGTCCAGTAACAACCTCACTGGGACACTGCCAAATTTCACAAGTTGGAATGTTAGCTCTGCTGGTGCTGTGTTCAATTTGTCAAACAATTTGTTCTATGGAGATCTGAACACTTCACTGTACATGTTTAAAACAATTGATTTGTCAAGTAATTATTTGGAAGGTGAGGTGCAAGGTGGTGGTAACGTTATTCTAGATAGAAATTGCCTACAGATGGCTCCAAACCAGAGGAATTTGGAAGAGTGTAAAGAATTTTATGTTGCAAGAAATTTAACCTCTGCATTCCTAGAATCTAAGTCCAGGAGCAGCAGAAGGGTGGTATTCATACTGGTAGGAATATTTGGGGGGCTTGCCTTTATTGCTGTGCTGACATTGGTCCTCGTGCTGGTTCTAAAACAACGTCACAATCGTAGAAGCTTGGAAGTTCAAAGGGGGACCAAAGAAGAGGGACCTGTTCAGGAAGGGGAAAGCCCTATACCTCCTAAGGATGCTGATTTTGTGACTGGCGTGGGAGAAGCATTTAGTTCTGAGAAAATTATCCATTTAACTGGCAATTTTGCTGAAGCGAATATCATAAAGCATGGCCATTCTGGGGTCCTCTTCTTGGGAGTCATGGAAGGTGGAGCAACTGTGGTTGTCAAAAGGATAGATTTGAGTTTATTTAAGAGAGAATCATACATCGTGGAATTGGGACTATTAAGTAAGGTTTCACATGCAAGATTTGTCCCAATCCTGGGCCACTGCTTGGACAATGAGAATGAGAAATGTATAGTTTACAAGTACATGCCAAATAGAGATTTGGCTACTTCTTTGCACAGAGTCAACGAGTCAGATGGTAAATTGCAGTCCCTGGATTGGATCACGAGATTGAAAATTGCAATAGGAGCTGCTGAAGGCCTAGCTTACCTACATGAGTGCAGCCCTCCCCTTGTCCACAGGGATGTCCAATCTAGCAGTATACTTCTTGATGATAAATTTGAAGTGCGACTTGGAAGTTTGAGCCAGGTTACCGCCCAAGGAGATCTTCAACAGGGAGTCATCTCAAGGGTTTTCAGCAAGCCACCACCTTCTAGTGAAGGCGATCCTGGTAAATCATCAGTGACATGCACCTACGACGTGTACTGTTTCGGGAAGATTTTACTGGAACTCATCACCGGTAACATTGAAGTGAGCAAGTCAGATGATGGCACTTCAAAAGAGTGGTTAGATCAAACCTTGCCTTACATCACTCTGTATGATAAAGAACGAGTGACTAAGATTGTTGATCCACAATTGATTGTGGATGAGGACCTATTGGAAGAAGTATGGGCCATGGCAATTGTGGCTCATGCATGCTTGAATCCCAAGCCTTCCAAACGTCCTCCCATGAGACATGTCCTGAAAGCATTGGAAAATCCATTGAAGATTGTGAGAGAAGAAAATGTTAGCTCAGCAAGGTTGAGAACAAACTCTTCTAGGAAATCTTGGAGCACTGCATTCTTTGGTAGCTGGAGACACAGCTCATCAGACAGTGTTGTGGCCATAACACATACAAACAAAGAGAGTACCAGTGACACTAAAAAATCAAGAGTAGGTTCTCAAAGCAGTGGAAATGATCACTCATCTTCCAATAAAAGGTCATCCAATGAAATTTTCCCTGAACCATTGGACATGCAAGATGTGGAGAGTGGAGGGGCAAGATAA | 2580 | 0.438 | MGMGAIAESVVSVLLLMFGLTMGMGLSSRPEWVALRELRSSLGIRAKYWPIKAEPCRNWTGVQCRKGRVVGLNLSGLRRTRLGSVNPSFEVGSLVNLTLLESFNASGFVLNGSIPEWLGGRLRVLDVLDLRFCSITGWIPYSIGKLSVLKVLVLSGNFLTGRMPSTLGNLTRLSVLDLSANSLSGYVPASVSKLGNLTRLDLSGNYFSGSVPPELGALSSLQKLNLSGNSFTGSIPSQLGNLFELVEVDLSMNFLSGSFPGDLFFSRLLALEVLILRGNSFDGVLHDNLRLTPRLSFLDVSSNNLTGTLPNFTSWNVSSAGAVFNLSNNLFYGDLNTSLYMFKTIDLSSNYLEGEVQGGGNVILDRNCLQMAPNQRNLEECKEFYVARNLTSAFLESKSRSSRRVVFILVGIFGGLAFIAVLTLVLVLVLKQRHNRRSLEVQRGTKEEGPVQEGESPIPPKDADFVTGVGEAFSSEKIIHLTGNFAEANIIKHGHSGVLFLGVMEGGATVVVKRIDLSLFKRESYIVELGLLSKVSHARFVPILGHCLDNENEKCIVYKYMPNRDLATSLHRVNESDGKLQSLDWITRLKIAIGAAEGLAYLHECSPPLVHRDVQSSSILLDDKFEVRLGSLSQVTAQGDLQQGVISRVFSKPPPSSEGDPGKSSVTCTYDVYCFGKILLELITGNIEVSKSDDGTSKEWLDQTLPYITLYDKERVTKIVDPQLIVDEDLLEEVWAMAIVAHACLNPKPSKRPPMRHVLKALENPLKIVREENVSSARLRTNSSRKSWSTAFFGSWRHSSSDSVVAITHTNKESTSDTKKSRVGSQSSGNDHSSSNKRSSNEIFPEPLDMQDVESGGAR* | 860 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu1g0148 | 859 | Gene3D | Phosphorylase Kinase; domain 1 | 461 | 560 | - | - | |
| Pvu1g0148 | 859 | PANTHER | OS03G0724300 PROTEIN | 7 | 845 | - | - | |
| Pvu1g0148 | 859 | SUPERFAMILY | L domain-like | 32 | 357 | - | - | |
| Pvu1g0148 | 859 | ProSiteProfiles | Protein kinase domain profile. | 485 | 767 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Pvu1g0148 | 859 | PANTHER | OS01G0253100 PROTEIN | 7 | 845 | IPR045271 | GO:0004714|GO:0006468 | |
| Pvu1g0148 | 859 | MobiDBLite | consensus disorder prediction | 820 | 842 | - | - | |
| Pvu1g0148 | 859 | SMART | LRR_typ_2 | 218 | 242 | IPR003591 | - | |
| Pvu1g0148 | 859 | SMART | LRR_typ_2 | 194 | 217 | IPR003591 | - | |
| Pvu1g0148 | 859 | SMART | LRR_typ_2 | 146 | 169 | IPR003591 | - | |
| Pvu1g0148 | 859 | SMART | LRR_typ_2 | 170 | 193 | IPR003591 | - | |
| Pvu1g0148 | 859 | Gene3D | Ribonuclease Inhibitor | 190 | 401 | IPR032675 | - | |
| Pvu1g0148 | 859 | Pfam | Leucine Rich Repeat | 220 | 242 | IPR001611 | GO:0005515 | |
| Pvu1g0148 | 859 | Gene3D | Ribonuclease Inhibitor | 32 | 189 | IPR032675 | - | |
| Pvu1g0148 | 859 | Pfam | Protein tyrosine and serine/threonine kinase | 491 | 761 | IPR001245 | GO:0004672|GO:0006468 | |
| Pvu1g0148 | 859 | Pfam | Leucine rich repeat | 149 | 206 | IPR001611 | GO:0005515 | |
| Pvu1g0148 | 859 | MobiDBLite | consensus disorder prediction | 809 | 859 | - | - | |
| Pvu1g0148 | 859 | SUPERFAMILY | Protein kinase-like (PK-like) | 469 | 762 | IPR011009 | - | |
| Pvu1g0148 | 859 | MobiDBLite | consensus disorder prediction | 441 | 460 | - | - | |
| Pvu1g0148 | 859 | Gene3D | Transferase(Phosphotransferase) domain 1 | 561 | 785 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu1g0148 | Pvu-Chr1 | 1204951 | 1210271 | Dispersed/Wgd |
Transcription factors information